Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 474 a.a., 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  216 bits (551), Expect = 9e-61
 Identities = 155/468 (33%), Positives = 235/468 (50%), Gaps = 52/468 (11%)

Query: 4   TLAEKILAKASGNSEV---SPGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKI 60
           T+A K L +   ++ +     G+  +  V+  +VH++T P + + LK  G  ++   EK 
Sbjct: 7   TIAPKTLYQKVWDAHIVATPEGEAPIIYVDRHLVHEVTSPQAFSGLKVAG-RQLRAPEKT 65

Query: 61  VIPFDHQIPADSINAAENHILMRNFVKE--QNIKHF----YDIR---EGVCHQVLPEKGH 111
               DH     S +      + R  V+   QN K F    YDI    +G+ H + PE G 
Sbjct: 66  FATMDHNTSTRSASLDALSPMARIQVETLAQNCKDFGVLLYDIHHPNQGIVHVMGPELGI 125

Query: 112 IVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGELKPE 171
            +PGTV+V  DSHT T+GAFGA A GIG++++    AT  L     +T+   + G++   
Sbjct: 126 TLPGTVIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLRQLKAKTMKIEVRGQVTDG 185

Query: 172 VMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIAPDD 231
           V +KD++L+IIG +G DG T    +F G  ++ +++  RMT+ NMAIEMG KAG++APD 
Sbjct: 186 VTAKDIVLAIIGKIGMDGGTGYVVEFCGEAIEALSMEGRMTVCNMAIEMGAKAGMVAPDQ 245

Query: 232 KTINYVKN---AMEANNTAKP---FELVLGDKNAEFEEKFEIDVSNLEPVMACPHNVDNV 285
            T +Y++    A +  + A+    ++ +  D  AEF+    +D +++ P +    N   V
Sbjct: 246 TTFDYLEGREFAPKGEDWAQAVAEWKTLKTDVGAEFDATVVLDAADIAPQLTWGTNPGQV 305

Query: 286 KAVRE--------------------------VAGTP-----IDQVFIGSCTNGRLEDLRA 314
            A+                             AGTP     I++VFIGSCTN R+EDLR+
Sbjct: 306 VAIDAPVPNPADEVNPTIRSSMEKALDYIGLTAGTPMTEVAINKVFIGSCTNSRIEDLRS 365

Query: 315 ALNVIEKHGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALYG 374
           A     K   ++  +  +V P S  +  +A  EGL K F + G     P CS C+     
Sbjct: 366 AAKHA-KGRKVAAGVTAIVVPGSGQVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNDD 424

Query: 375 LLGPGEVGIATSNRNFRGREGSLESDVYLASPITAAACAVKGEIVDPR 422
            L  G+   +TSNRNF GR+G   S  +L SP  AAA A+ G  VD R
Sbjct: 425 RLEAGDRCASTSNRNFEGRQGR-GSRTHLVSPAMAAAAAIAGHFVDIR 471