Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 419 a.a., 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  386 bits (991), Expect = e-112
 Identities = 201/425 (47%), Positives = 269/425 (63%), Gaps = 7/425 (1%)

Query: 1   MAMTLAEKILAKASGNSEVSPGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKI 60
           MA TLA+KIL + +  +    G IV  +V   + +DIT PL++ + +  G  +V+D +++
Sbjct: 1   MAHTLAQKILQRHTDEAITDAGQIVRCRVSMVLANDITAPLAIKSFRAMGAKRVFDKDRV 60

Query: 61  VIPFDHQIPADSINAAENHILMRNFVKEQNIKHFYDIRE-GVCHQVLPEKGHIVPGTVVV 119
            +  DH  P   I AA+   L R F +E  + H+Y+  + GV H +LPE G + PG VVV
Sbjct: 61  ALVMDHFTPQKDIEAAQQVKLTREFAREMGVTHYYEGGDCGVEHALLPELGLVGPGDVVV 120

Query: 120 GADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGELKPEVMSKDVIL 179
           GADSHTCTYG  GAFATG+GSTD+A A A GE WFKVP T+    TG L   V +KD+IL
Sbjct: 121 GADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPTIRATFTGTLPAYVGAKDLIL 180

Query: 180 SIIGMVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIAPDDKTINYVKN 239
           ++IG +G DGA Y+A +F G  ++ + +  RMTM+NMAIE GGKAGL A D KT+ Y   
Sbjct: 181 TLIGAIGVDGALYRALEFDGAAIEALDVEGRMTMANMAIEAGGKAGLFAADAKTLTYCTT 240

Query: 240 AMEANNTAKPFELVLGDKNAEFEEKFEIDVSNLEPVMACPHNVDNVKAVREVAGTPIDQV 299
           A    +TA        D  A +E +   DV+ + PV+ACPH  DNVK V EV    + QV
Sbjct: 241 AGRTGDTA-----FSADAGAVYERELSFDVTGMTPVVACPHLPDNVKPVSEVKDVTVQQV 295

Query: 300 FIGSCTNGRLEDLRAALNVIEKHGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCV 359
            IGSCTNGR+ DLR A  V+ +   +S+D+R +V PA+  I  +A+ EGLI+ F + GC+
Sbjct: 296 VIGSCTNGRIGDLREAAAVL-RGRKVSRDVRCIVLPATPGIWRQALREGLIETFMEAGCI 354

Query: 360 VTNPSCSACMGALYGLLGPGEVGIATSNRNFRGREGSLESDVYLASPITAAACAVKGEIV 419
           V   +C  C+G   G+L  GE  IAT+NRNF+GR GSLES+VYL+ P TAAA AV G I 
Sbjct: 355 VGPATCGPCLGGHMGILADGERAIATTNRNFKGRMGSLESEVYLSGPATAAASAVTGVIT 414

Query: 420 DPRDL 424
           DP  L
Sbjct: 415 DPSTL 419