Pairwise Alignments

Query, 122 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 417 a.a., cytochrome c-type biogenesis protein CcmH (RefSeq) from Shewanella amazonensis SB2B

 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 41  TESIDLFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAK 100
           ++ + + E A+Q  P+ S+ W   G A  +  R++EAV+ ++ V+ ++    + ++   K
Sbjct: 146 SQRVQMMEMAVQAEPDNSQAWFNLGHAYISANRFDEAVNAFDKVMALVGT--HAELLGPK 203

Query: 101 ADALRHIEGKEVEAEI 116
           A AL +   +++ AEI
Sbjct: 204 ATALYYKNNQQMSAEI 219



 Score = 24.3 bits (51), Expect = 0.002
 Identities = 8/41 (19%), Positives = 24/41 (58%)

Query: 46  LFEKAIQLNPEESKYWLMKGKALYNLERYEEAVDCYNYVIN 86
           L ++++ L+P++    L+ G   +    Y++A+D +  +++
Sbjct: 222 LVDQSLALDPQDPSTLLLVGMDSFFTANYQKAIDAWQSILS 262