Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 828 a.a., FIG003033: Helicase domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  231 bits (590), Expect = 1e-64
 Identities = 214/822 (26%), Positives = 375/822 (45%), Gaps = 70/822 (8%)

Query: 29  GRNTLICSPTGSGKTLSSFIAIINELFRI-------EKEEGLQNSIYCLYISPLKSLAND 81
           G + L+ + TG+GKT + ++A +N   R         K +     +  L+I+P+++LA D
Sbjct: 33  GESGLLHASTGAGKTYAVWLAALNRFARPAPPLDKPRKRKPPAEPLTVLWITPMRALAAD 92

Query: 82  IHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTTPETLAI 141
               L+ PL ++                 +R GDTS  E+++  ++ P  L TTPE+L +
Sbjct: 93  TGKALEAPLADLHLPWSV----------GLRTGDTSANERARQGRRLPTALITTPESLTL 142

Query: 142 ILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRIGCSATVEP 201
           IL        + T++ V++DE H L  NKRGV L ++L RLR   + E +  G SAT+  
Sbjct: 143 ILARADAHTAVSTLRMVVVDEWHELLGNKRGVQLQLALARLRHW-HPELIVWGVSATLGN 201

Query: 202 LEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKE------ISEKL 255
                  L      G    V+  D + +R         VD L+  T +       I  K+
Sbjct: 202 QAHAGQVL---IPQGNGISVQGADGKALR---------VDTLLPPTLERFPWAGHIGLKM 249

Query: 256 YEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKRLELE 315
             ++   I    + L+FTNTR  +E     L +  P+         HH SLS++ R  +E
Sbjct: 250 LPRVVAEIDASRSCLVFTNTRAQSEIWYQALLETRPDWAGLI--ALHHSSLSRDTRDWVE 307

Query: 316 EKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGKVAKGRI 375
           + LK G LK    +SSL+LG+D   ++ V+QIGS K V  ++QR GR+GH  G+ ++  +
Sbjct: 308 QALKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRTSRVTL 367

Query: 376 IALDRDELLECAVMLKKAMDGFIDKVHIPKGPLDVLIQHIYGIAINGYIELERVKNIVRR 435
           +     EL+E A          I+    P+ PLDVL+QH+  +A+ G    + +   VR 
Sbjct: 368 VPTHSLELIEAAAAQDAVAQRRIEPRESPRKPLDVLVQHLVSMALGGGFVSDELFEEVRG 427

Query: 436 SYNYHDITDEDFKILINYMTASYAGMDEKRIYSKIWYDPDTQMIGKT--GKTARAIYYMN 493
           ++ Y D+   ++   + ++      +     Y ++  +PD   + +    + AR  + M+
Sbjct: 428 AWAYRDLNPAEWAWALAFVRHGGLSLTAYPDYRRV--EPDEHGVWRVPDARLARR-HRMS 484

Query: 494 IGTIPDDFSCDVYL---RGTTIWIGKLDEQYLDRLEKGDVFTLGGEHLKFQYRRGSKVYV 550
           IGTI  D S  +      G    +G ++E ++ RL  GD F   G  L+         YV
Sbjct: 485 IGTIVSDASLQLKFWSKGGGGKTLGSVEEGFIARLRPGDGFLFAGRLLELVRVEDMTAYV 544

Query: 551 DKT-SERPNIPSWYSERLPLSYDLGRNILLFKKEAVSKYNAGRLLDLLSEYPLDSNATKS 609
            ++ +++  +P W   R+PLS +L   ++    EA     AGR          +     +
Sbjct: 545 RRSQAKKAAVPRWNGGRMPLSSELAAAVVARLSEAA----AGR---------FEGPEMHA 591

Query: 610 LYGLFNEQILYKGNDSVSTLNKMVVEGHIFDKKMHYYFHSNYGRKFNDGFSRAVAYALSK 669
           +  L   Q  + G  + STL   + E     +  H + +   GR+ + G +  +A+ +S+
Sbjct: 592 VQPLLLTQQRWSGLPTQSTL---LAEALKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQ 648

Query: 670 QYKLGVLVSISDTGFSLEFAKNQKVDIESAIRS--LTPENIKDVLKQALEGTNLLKRMFR 727
           Q  L   ++++D G  LE      VD    +    L+ +++   +  +L    L  R FR
Sbjct: 649 QQPLTFSIAVNDYG--LELLSATAVDWSQYLTPGLLSVDHLLTDVLASLNAGELALRRFR 706

Query: 728 INATRSLMILRNYIGHKKSAKKQQVSADILISYAKSLDR-FAPLEETLREIIEDSLELDN 786
             A  + ++   Y G  KS ++ Q S+ +     K  D     L +   E++ + L++  
Sbjct: 707 EIARIAGLVFAGYPGAPKSTRQVQASSGLFFQVFKQYDADNLLLAQAGEEVLREELDIRR 766

Query: 787 IREVLGEIRSGKLKINVIDVPIPTPMSFGIATLTASDSVLAE 828
           + + L  + + KL ++VI    PTP+ F +      +S+ +E
Sbjct: 767 LEQTLQRLNTLKLDLHVI--KRPTPLGFPLLVERFRESMSSE 806