Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 487 a.a., ATP-dependent DNA helicase RecQ from Synechococcus elongatus PCC 7942

 Score = 62.0 bits (149), Expect = 8e-14
 Identities = 83/360 (23%), Positives = 144/360 (40%), Gaps = 59/360 (16%)

Query: 15  FTPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISP 74
           F P Q   +  I  GR+ LI  PTG GK+L          F++     L  S   + ++P
Sbjct: 36  FRPGQAEIVEAIAQGRDCLIIWPTGGGKSLC---------FQVP---ALLRSGLTIVVTP 83

Query: 75  LKSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHI--L 132
           L +L  +   +L                +  GI  A  H   +  ++  +L+K P +  L
Sbjct: 84  LIALIENQVADL----------------QARGIAAACLHSQMAPRDRKAVLQKLPQLKLL 127

Query: 133 NTTPETLAIILNSPKFKEKLKTVQWVIIDEIHAL---ADNKRGVHLSISLERLRELTNQE 189
              PETL       +  E    +  +I+DE H L    ++ R  +L +   R        
Sbjct: 128 YLAPETLLSTPLWSRLTEPTIAIAGLILDEAHCLLQWGESFRPTYLRLGAIR------PA 181

Query: 190 FLRIGCSATVEPLEMVADYLGGYYDDGYKRPVEIVDTRFVRG-----YDLKLLCPVDDLI 244
            +R+G     +P   +A +    Y     R  +I+  +  +      Y   L+  V  + 
Sbjct: 182 LVRLG-----KPSFPIAAFTATAYPQEVARLSQILQLQQPQRHQRDPYRSNLVLAVKTVW 236

Query: 245 NKTPKEISEKLYEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHG 304
             TP++   +L + L +     ++ LI+  +R   E     LR R            +H 
Sbjct: 237 --TPRQRQNQLLDFLAK--HQGQSGLIYLRSRRDCETWADRLRNR------GYRCAAYHA 286

Query: 305 SLSKEKRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAG 364
            +S  +R ++E+  ++G+L FA  SS+  +GID   +  V  +  P  +   LQ +GR G
Sbjct: 287 GVSDRERRQIEQAWQTGSLPFAVCSSAFGMGIDKRDVRWVAHVHPPLLLSEYLQEVGRGG 346