Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 456 a.a., DEAD/DEAH box helicase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 61.6 bits (148), Expect = 1e-13
 Identities = 89/390 (22%), Positives = 157/390 (40%), Gaps = 54/390 (13%)

Query: 16  TPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPL 75
           TP Q  AIP    G++ +  S TGSGKTL+  +  +  +  I  +   +     L + P 
Sbjct: 25  TPIQSQAIPVALAGKDLMASSKTGSGKTLAFLLPAMQRV--ISSKALSKKDPRVLILLPT 82

Query: 76  KSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTT 135
           + LA  ++  L          L     +   I  ++  G+  N +++K L + PH +  T
Sbjct: 83  RELAQQVYAQLR---------LLVANTQYRAI--SVLGGENFN-DQAKALAREPHFIVAT 130

Query: 136 PETLAIILNSPKFKEKLKTVQWVIIDEIHALAD-----NKRGVHLSISLERLRELTNQEF 190
           P  +A  L        L  ++ +++DE   + D       + ++ +    R + L     
Sbjct: 131 PGRIADHLQQRHLF--LNGLELLVLDEADRMLDLGFAPQLKAINAAADHRRRQTLMFSAT 188

Query: 191 LRIGCSATVEPLEMVADYLGGYYDDGYKRPVEI-VDTRFVRGYDLKLLCPVDDLINKTPK 249
           L  G     E  E+ A+ L        K P  + +D   +   D++    + D +     
Sbjct: 189 LEHG-----EVHELAAELL--------KEPEHVAIDAVHLGHGDIEQQILLADHL----- 230

Query: 250 EISEKLYEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKE 309
           E  E L E+L          +IFT TR   ER+   L ++        N+    G L + 
Sbjct: 231 EHKEALLERL-LSGNNFRQVMIFTATRQDTERLATLLAEK------GYNTAALSGELRQA 283

Query: 310 KRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGK 369
           +R ++ +     + +   T+     G+D+  + LVV    PK  +  + RIGR G     
Sbjct: 284 QRNQIMDSFSREHHRILVTTDVASRGLDISNVSLVVNFDMPKFAEEYVHRIGRTGRAGN- 342

Query: 370 VAKGRIIAL----DRDELLECAVMLKKAMD 395
             KG  I+L    D D  L+  ++L+K  +
Sbjct: 343 --KGTAISLVGPKDWDNFLKVQILLQKTFE 370