Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 393 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score = 63.2 bits (152), Expect = 3e-14
 Identities = 87/388 (22%), Positives = 162/388 (41%), Gaps = 38/388 (9%)

Query: 16  TPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPL 75
           TP Q  AIP    GR+ L  + TG+GKT S  + ++  L + + +  +      L ++P 
Sbjct: 26  TPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPLLQRLTK-DPQPRVPGRPRALILTPT 84

Query: 76  KSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTT 135
           + LA            +I E + + G  ++ IR  +  G      +++M+++   IL  T
Sbjct: 85  RELAQ-----------QITESIGDLGRTLSAIRCGVVVGGVDILRQTRMVQRGLEILVAT 133

Query: 136 PETLAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRIGC 195
           P  L  ++N       L+ ++ +++DE    AD    +  + +++++  +  ++   +  
Sbjct: 134 PGRLQDLMNRKAVD--LRAIEVLVLDE----ADRMLDMGFAPAVKKIAAVLPRKRQTVMF 187

Query: 196 SATVEPLEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKEISEKL 255
           SAT+ P E V   +    +D  +  VE+     V          +D  +    +    KL
Sbjct: 188 SATL-PNE-VTGLVASLMNDPVR--VEVAPAASVANR-------IDQRVLFVEQTNKRKL 236

Query: 256 YEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKRLELE 315
              L    +  E  ++FT T+ GA ++   L + Y  K D       HG+ S+  R    
Sbjct: 237 LLDLLGDARKVERAIVFTRTKHGANKLGIFLLE-YGVKSDVI-----HGNKSQGARQRAL 290

Query: 316 EKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGR-AGHGIGKVAKGR 374
              KSG ++    +     GID+  I  V+    P   ++ + RIGR A  G   +A   
Sbjct: 291 NDFKSGKVRALVATDIAARGIDVDGITHVINFDLPNEPESYVHRIGRTARAGAAGIALSL 350

Query: 375 IIALDRDELLECAVMLKKAMDGFIDKVH 402
               +   L     ++K  +D  +D  H
Sbjct: 351 CAPQEMPYLKAIEKVIKSRID--VDSTH 376