Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 811 a.a., DNA damage response helicase, ligase-associated (from data) from Phaeobacter inhibens DSM 17395

 Score =  229 bits (585), Expect = 4e-64
 Identities = 227/827 (27%), Positives = 372/827 (44%), Gaps = 88/827 (10%)

Query: 32  TLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPLKSLANDIHVNLDEPLT 91
           TL+ +PTG GKT++ F+  + +L       G    ++ LY+SPLK+LA DI  NL  P+ 
Sbjct: 35  TLLIAPTGGGKTMAGFLPTLADL-----ATGDHQGLHTLYVSPLKALAADIKRNLRTPVE 89

Query: 92  EIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTTPETLAIILNSPKFKEK 151
           ++             IR   R GDT    K       PHIL TTPE+LA++ +       
Sbjct: 90  DMG----------LPIRIDDRTGDTPASRKRSQRADPPHILLTTPESLALLTSYEDAPRM 139

Query: 152 LKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRIGCSATVEPLEMVADYLGG 211
              ++ V++DEIHALA++KRG  L ++L RL+ +   +  R+G SATV+    +A YL  
Sbjct: 140 FAGLKRVVLDEIHALAESKRGDQLMLALTRLQAIC-PDMRRVGLSATVDDPAAIAQYLAR 198

Query: 212 YYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKEISEKLYEKLDRLIQTHENTLI 271
           +       P +IV        D+++L   D          +  +   L++ I+ H  TLI
Sbjct: 199 H-----PAPCDIVLADPGPAPDIRML-HTDAAPPWAGGGAAHAIPAVLEQ-IKAHRTTLI 251

Query: 272 FTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKRLELEEKLKSGNLKFATTSSS 331
           F NTR  AE    NL   +    D    G HHGSL + +R  +E  +  G L+    + S
Sbjct: 252 FHNTRAQAEIFFRNL---WLANDDALPIGIHHGSLDRVQRDRVEAAMVRGELRAVVCTGS 308

Query: 332 LELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGKVAKGRIIALDRDELLECAVMLK 391
           L+LGID   +DLV+QIG+PK+VK ++QRIGRA H     +K  ++  +R E++EC   L+
Sbjct: 309 LDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEVVECRAALE 368

Query: 392 KAMDGFIDKVHIPKGPLDVLIQHIYGIAINGYIELERVKNIVRRSYNYHDITDEDFKILI 451
               G +D      GP DVL QHI   A  G    + +   V  +  Y  +T  +F   +
Sbjct: 369 AVEAGTLDGSPRSPGPRDVLCQHILIRACAGPFAADDLFAEVTGAGAYASLTRAEFDACL 428

Query: 452 NYMTASYAGMDEKRIYSKIWYDPDTQMIGKTGKTARAIYYMNIGTIPDDFSCDVYLRGTT 511
           ++       +     + ++   PD     +  + AR I  MNIGTI D     V L+ + 
Sbjct: 429 DFCATGGYALRVYDQWQRLLQRPDGLWQLRDPRAARRI-RMNIGTIQDADLLKVRLKRSR 487

Query: 512 IW--IGKLDEQYLDRLEKGDVFTLGGEHLKFQYRRGSKVYVDK-TSERPNIPSWYSERLP 568
               +G+++E +   L  GD F +GG+ ++++  R   V V +  S+ P +         
Sbjct: 488 GGKPLGEIEEAFAATLTPGDTFLIGGQVVRYESLREMTVEVSRNASKTPKVA-------- 539

Query: 569 LSYDLGRNILLFKKEAVSKYNAGRLLDLL--SEYP-LDSNATKSLYGLFNEQILYKGNDS 625
                   +    K A S   + R+LD+L    +P L S+    L        L +    
Sbjct: 540 --------VFSGTKFATSTQLSTRILDILQRDSWPDLPSHTADWL-------ALQRQVSE 584

Query: 626 VSTLNKMVVEGHIFDKKMHYYFHSNYGRKFNDGFSRAVAYALSKQYKLGVLVSISDTGFS 685
           +    ++++E   F  + +   +   GR              +    LG+L++      S
Sbjct: 585 MPRRGQLLLESFPFRGREYLCVYGFAGR--------------NAMQTLGLLLTKRMEELS 630

Query: 686 LEFAKNQKVDIESAIRSLTPEN------IKDVLKQALEG----TNLLKRMFRINATRSLM 735
           L+       D  + I  L+P          D L+  L+G      ++KR FR  A  + +
Sbjct: 631 LDPLGFVATDYATLIWGLSPVADPAPLFDPDKLRAGLDGWLADNAVMKRSFRAVANIAGL 690

Query: 736 ILRNYIGHKKSAKKQQVSADILISYAKSLD-RFAPLEETLREIIEDSLELDNIREVLGEI 794
           I RN  G +KS ++   S+DIL    +  D     L+ T +E +   ++   I E+L  I
Sbjct: 691 IERNTPGQRKSGRQATFSSDILYDTLRKYDPDHLLLDITRQEALGGLVDFGRIEEMLTRI 750

Query: 795 RSGKLKINVID--VPIPTPMSFGIATL----TASDSVLAENKNQLLK 835
            +G + +N +    P+  P+   +  +     A + +L      L++
Sbjct: 751 -NGNITLNRLSQISPLAAPLLLEVGKVPVKGAAQEKLLQRETEDLMR 796