Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 451 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 93/392 (23%), Positives = 152/392 (38%), Gaps = 54/392 (13%)

Query: 16  TPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPL 75
           T  Q   IP    GR+ + C+ TG+GKT +    ++  L    +  G    +  L ++P 
Sbjct: 25  TQVQAKVIPTALAGRDLMACAQTGTGKTAAFSFVLLQRLLNQPRAIG---QLSALILTPT 81

Query: 76  KSLANDIHVNLDE--PLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILN 133
           + LA  +  ++      TE+  +    G  I   R A+  G                IL 
Sbjct: 82  RELAIQVADSISRYSQFTELTTLAVYGGANINPQRKALARG--------------VDILV 127

Query: 134 TTPETLAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQEFLRI 193
            TP  L  +L        L+TV  +I+DE    AD    +     +ER + L       +
Sbjct: 128 ATPGRLFDLLGQHDLS--LETVDQLIVDE----ADRMLDMGFVRDIERTKRLLCVSHSTM 181

Query: 194 GCSATVEP-LEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKL-LCPVDDLINKTPKEI 251
             SAT  P ++ +A  +          P  I  T    G  ++  + P+D       +  
Sbjct: 182 LFSATFTPEVKALATKM-------LDNPEWINVTSASSGPQIEQKIYPLD------ARRK 228

Query: 252 SEKLYEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKR 311
           +E L E + R     +  L+F NT+  AER+   L      K D   +   HG  ++  R
Sbjct: 229 AELLAELIGR--NNWQQVLVFVNTKESAERLHREL------KLDGIKNAVFHGDKTQGAR 280

Query: 312 LELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGH------ 365
               E+ K+G L+    +     G+D+  + LV+ +  P   +  + RIGR G       
Sbjct: 281 NRALEQFKAGELRVLVATDVAARGLDITALPLVINLELPDEPQDYVHRIGRTGRAGLSGV 340

Query: 366 GIGKVAKGRIIALDRDELLECAVMLKKAMDGF 397
            I  VAK    AL   E L    + ++   G+
Sbjct: 341 SISFVAKQDETALGAIEALIGKTLPREVQPGY 372