Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 460 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 90/372 (24%), Positives = 156/372 (41%), Gaps = 56/372 (15%)

Query: 16  TPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPL 75
           T  Q  +IP    GR+ +  S TGSGKTL+  +  +  +  I  +   +     L + P 
Sbjct: 38  TEIQTQSIPVGLSGRDLMASSKTGSGKTLAFLLPAMQRV--IATKALSKRDPRVLILLPT 95

Query: 76  KSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTT 135
           + LA  ++  L          L     +   I+  I  G+  N +++K L + PH +  T
Sbjct: 96  RELATQVYSQLR---------LLVANTQYKAIK--ILGGENFN-DQAKALARDPHFVVAT 143

Query: 136 PETLAIILNSPKFKEKLKTVQWVIIDEIHAL-----ADNKRGVHLSISLERLRELTNQEF 190
           P  LA  L        L  ++ +I+DE   +     A+  R ++ +   +R + L     
Sbjct: 144 PGRLADHLAQRHL--YLNGLELLILDEADRMLDLGFAEQLRAINQAADHKRRQTLMFSAT 201

Query: 191 LRIGCSATVEPLEMVADYLGGYYDDGYKRPVEI-VDTRFVRGYDLK---LLCPVDDLINK 246
           L  G     +  E+ A+ L        K P  + +    V   D+     LC  D+L +K
Sbjct: 202 LDHG-----QINEIAAELL--------KEPEHVAIGASHVENQDIAQKIYLC--DNLSHK 246

Query: 247 TPKEISEKLYEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSL 306
                 E+L  +L +L + H+  +IFT TRG  +R+   L ++        ++    G L
Sbjct: 247 ------EQLLTRLLQL-EPHKQVIIFTATRGDTDRLAGVLAEQ------GFSTSSLSGEL 293

Query: 307 SKEKRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHG 366
            +  R ++ ++   G  +   T+     G+D+  + LV+    PK  +  + RIGR G  
Sbjct: 294 KQAARNQIMDQFSRGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYIHRIGRTGRA 353

Query: 367 IGKVAKGRIIAL 378
               AKG  I+L
Sbjct: 354 ---GAKGDAISL 362