Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 441 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 60.8 bits (146), Expect = 2e-13
 Identities = 94/393 (23%), Positives = 163/393 (41%), Gaps = 52/393 (13%)

Query: 16  TPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPL 75
           TP Q  AIP I  GR+ L  + TGSGKT +  + ++ +L  + +  G  N +  L + P 
Sbjct: 48  TPIQAKAIPAILAGRDLLAGAKTGSGKTAAFALPLLQKL--VGQRAGGGNHVGALVLVPT 105

Query: 76  KSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIR-HGDTSNYEKSKMLKKTPHILNT 134
           + LA            ++ +     G E+      I   G  S   +   L+    IL  
Sbjct: 106 RELAQ-----------QVADSFISYGAELAPRAKVIAVFGGVSVNSQMLALRGGADILVA 154

Query: 135 TPETLAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISL-ERLRELTNQ-EFLR 192
           TP  L  +L S   K  L  ++ +++DE    AD    +  +  L E L++L +Q + L 
Sbjct: 155 TPGRLLDLLGSNAVK--LSQLKALVLDE----ADRMLNLGFTEELGEILKQLPDQKQTLL 208

Query: 193 IGCSATVEPLEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKEIS 252
              +   E L + A  L          PVEI   +  +  D++      +  NKT     
Sbjct: 209 FSATFPEEVLSLTAKLLTD--------PVEI-QMQEAQSADIEQRVYTVNRSNKTA---- 255

Query: 253 EKLYEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSKEKRL 312
             L  +L ++ Q  +  L+F + +   + +   L KR        ++   HG  ++  R 
Sbjct: 256 --LLAELIKVRQWRQ-VLVFASAKRSCDHLAQKLEKR------GISAQVFHGDKAQGARS 306

Query: 313 ELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIGKVAK 372
            + +  K+G +     +     GID+  + +V+    P+S    L RIGR+G   G+  +
Sbjct: 307 RVLDGFKNGEITVLIATDIAARGIDIDKLPVVINFELPRSPADYLHRIGRSGRA-GETGE 365

Query: 373 GRIIALDRDELLECAVMLKKAMDGFIDKVHIPK 405
             I  +  DE     V+ KK      +K+ +P+
Sbjct: 366 A-ISLISHDEYHHFKVIEKK------NKLRLPR 391