Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 491 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 63.2 bits (152), Expect = 4e-14
 Identities = 85/378 (22%), Positives = 150/378 (39%), Gaps = 51/378 (13%)

Query: 11  NNGYFTPP--QRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIY 68
           + GY TP   Q  AIP +  G++ +  + TG+GKT    + ++  L +  +    Q  + 
Sbjct: 18  DKGYQTPSPIQAQAIPAVLSGKDVMAAAQTGTGKTAGFTLPLLELLSQGPRARSKQ--VR 75

Query: 69  CLYISPLKSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKT 128
            L ++P + LA            +I E +   G  +  +R A+  G      +   LK+ 
Sbjct: 76  ALVLTPTRELA-----------AQIAESVTTYGQHLP-LRSAVVFGGVGISPQISQLKRG 123

Query: 129 PHILNTTPETLAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQ 188
             IL  TP  L  +            ++ +++DE    AD    +     ++++  +   
Sbjct: 124 VDILVATPGRLLDLYQQDAVS--FSQLETLVLDE----ADRMLDMGFIHDIKKILAILPP 177

Query: 189 EFLRIGCSATVEPLEMVADYLGGYYDDGYKRPVEIVDT--RFVRGYDLKLLCPVDDLINK 246
           +   +  SAT       +D +          PVEI  T          +L+CPVD     
Sbjct: 178 KRQNLMFSATF------SDEIRTLAKGLVNNPVEISVTPRNSTANTVQQLICPVD----- 226

Query: 247 TPKEISEKLYEKLDRLIQTHE--NTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHG 304
                  K    L +LIQ  +    L+F+ T+ GA R+  +L  +         +   HG
Sbjct: 227 -----KNKKSAALVKLIQQGDWQQVLVFSRTKHGANRLAKHLEAK------GITAAAIHG 275

Query: 305 SLSKEKRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAG 364
           + S+  R +     KSG+++    +     G+D+  +  VV    P   +  + RIGR G
Sbjct: 276 NKSQGARTKALANFKSGDVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTG 335

Query: 365 HGIGKVAKGRIIALDRDE 382
                 A G+ ++L  DE
Sbjct: 336 RA---GADGKAVSLVSDE 350