Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 1516 a.a., ATP-dependent helicase from Pantoea sp. MT58

 Score =  337 bits (863), Expect = 4e-96
 Identities = 260/867 (29%), Positives = 439/867 (50%), Gaps = 66/867 (7%)

Query: 16  TPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGL---QNSIYCLYI 72
           TP Q+ A   I  G + L+ +PTGSGKTL++F+  I+ LF++   +     + +   LYI
Sbjct: 36  TPVQQAAWQAIARGEHALVIAPTGSGKTLAAFLTAIDTLFQVRTSQPAPTRETTTRILYI 95

Query: 73  SPLKSLANDIHVNLDEPLTEI---KEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTP 129
           SP+K+LA D+  NL+ PL  +   ++ L E   EIT +   +R GDT + E++++L++ P
Sbjct: 96  SPVKALAADVQRNLNLPLAGVYAERQALNEP--EIT-LNIGMRSGDTPSTERARLLRRPP 152

Query: 130 HILNTTPETLAIILNSPKFKEKLKTVQWVIIDEIHALADNKRGVHLSISLERLRELTNQE 189
            IL TTPE+L ++L S K +  LK V  VI+DE+HA+A +KRG  L++SLERL  L  + 
Sbjct: 153 DILITTPESLFLMLTS-KARTTLKGVTTVIVDEVHAVAGSKRGSQLALSLERLDALLPKP 211

Query: 190 FLRIGCSATVEPLEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDL------ 243
             RIG SATV P+E VA +LGG       +PV++V+    R   L +  PV+D+      
Sbjct: 212 AQRIGLSATVRPVERVAAFLGGC------QPVQVVNPAANRTLHLTIEVPVEDMTDIASA 265

Query: 244 ------INKTPKEISEKLYEKLDRLIQTHENTLIFTNTRGGAERVLYNLRKRYPEKY--- 294
                 +      I   +  ++ + +  H  TL+F N+RG AE++   L  RY  +    
Sbjct: 266 DNLTDDVTSASGSIWPHIEARILQQVMAHRATLVFVNSRGLAEKLTARLNARYLAQQATA 325

Query: 295 ----------DETNSGCHHGSLSKEKRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLV 344
                     D+  +  HHGS+SKE+R E+E  LK G L+    +SSLELGIDM  +DLV
Sbjct: 326 EVQDAERTNDDDLIARSHHGSVSKEQRGEIEAALKQGRLRCVVATSSLELGIDMGPVDLV 385

Query: 345 VQIGSPKSVKTMLQRIGRAGHGIGKVAKGRIIALDRDELLECAVMLKKAMDGFIDKVHIP 404
           VQ+G+P SV + LQR+GRAGH +G V+ G +    R +LL+ AV+++    G +D +  P
Sbjct: 386 VQVGAPLSVASALQRVGRAGHQVGGVSTGILFPRTRRDLLDSAVIIESMRAGQLDALAPP 445

Query: 405 KGPLDVLIQHIYGIAINGYIELERVKNIVRRSYNYHDITDEDFKILINYMTASYAGMDEK 464
           + PLD+L Q          ++ +     V R+  +  ++   F   ++ +   +      
Sbjct: 446 RNPLDILAQQTLAAVAMDPLQADEWYAQVCRADPFRTLSRRLFDATLDMLAGKFPSDAFA 505

Query: 465 RIYSKIWYDPDTQMIGKTGKTARAIYYMNIGTIPDDFSCDVYL-----RGTTIWIGKLDE 519
           ++  ++ +D  + M+      A+ +   + GTIPD     V L     +  +  +G+LDE
Sbjct: 506 QLRPQLVWDRLSGML-TARPGAQHLAVTSGGTIPDRGMFSVILPEGEEQAGSRRVGELDE 564

Query: 520 QYLDRLEKGDVFTLGGEHLKFQYRRGSKVYVDKTSERP-NIPSWYSERLPLSYDLGRNIL 578
           + +      D+ TLG    + Q     +V V     RP  +P W  E +  S D G ++ 
Sbjct: 565 EMVYESRVNDIITLGATSWRIQKITHDQVQVVPAPGRPARLPFWRGEGVGRSADSGASLG 624

Query: 579 LFKKE--AVSKYNAGRLLDLLSEYPLDSNATKSLYGLFNEQILYKG---NDSVSTLNKMV 633
           +F ++  A S  +A + L  L    LD+ A  +L  L  EQ    G   +D    + +  
Sbjct: 625 MFLRQLNAASPDDAQQQLHALG---LDARAVTNLLTLLAEQRAATGVVPDDRTLLIER-- 679

Query: 634 VEGHIFDKKMHYYFHSNYGRKFNDGFSRAVAYALSKQYKLGVLVSISDTGFSLEFAKNQK 693
               I D ++    HS +G++ N  ++ A+A  + ++  +   V+ SD G    F  ++ 
Sbjct: 680 CRDEIVDWRV--ILHSPWGKRVNAPWALAIAARIQQRMGIDASVAASDDGIVARFPASEG 737

Query: 694 VDIESAIRSLTPENIKDVLKQALEGTNLLKRMFRINATRSLMILRNYIGHKKSAKKQQVS 753
               + +     +++   + Q++  + L    FR  A+R+L++ R   G +    +Q++ 
Sbjct: 738 HLPAADLFRFDADSLTQEVTQSVGQSALFAARFRECASRALLLPRRNPGKRSPLWQQRLR 797

Query: 754 ADILISYAKSLDRFAPLEETLREIIEDSLELDNIREVLGEIRSGKLKINVIDV----PIP 809
           A  L+  A+  D F  L ET RE ++D  +L  + +++ ++   ++K+  +      P  
Sbjct: 798 AGQLLEVARQFDDFPILIETARECLQDVYDLPALHQLMEKLALDQIKMVEVTTEHPSPFA 857

Query: 810 TPMSFGIAT--LTASDSVLAENKNQLL 834
            P+ FG     + ASD+  AE +  LL
Sbjct: 858 APLLFGYVAEFIYASDAPQAERRASLL 884