Pairwise Alignments

Query, 855 a.a., ATP-dependent helicase from Methanococcus maripaludis S2

Subject, 450 a.a., ATP-dependent RNA helicase RhlE from Klebsiella michiganensis M5al

 Score = 63.5 bits (153), Expect = 3e-14
 Identities = 85/385 (22%), Positives = 152/385 (39%), Gaps = 51/385 (13%)

Query: 16  TPPQRLAIPKIHFGRNTLICSPTGSGKTLSSFIAIINELFRIEKEEGLQNSIYCLYISPL 75
           TP Q+ AIP +  GR+ +  + TG+GKT    + ++  L + E     +  +  L ++P 
Sbjct: 25  TPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLLQHLVQKEPHAKGRRPVRALILTPT 84

Query: 76  KSLANDIHVNLDEPLTEIKEILKEEGNEITGIRHAIRHGDTSNYEKSKMLKKTPHILNTT 135
           + LA  I  N+             + ++   +R  +  G  S   +   L+    IL  T
Sbjct: 85  RELAAQIGENV------------RDYSKYLNVRSLVVFGGVSINPQMMKLRSGVDILVAT 132

Query: 136 PETLAIILNSPKFKEKLKTVQWVIIDEIHALAD-----NKRGVHLSISLERLRELTNQEF 190
           P  L  + +       L  V+ +++DE   + D     + R V   +  +R   L +  F
Sbjct: 133 PGRLLDLEHQNAVS--LDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAKRQNLLFSATF 190

Query: 191 LRIGCSATVEPLEMVADYLGGYYDDGYKRPVEIVDTRFVRGYDLKLLCPVDDLINKTPKE 250
                    + ++ +A+ L          P+EI   R     +      V  L++   K+
Sbjct: 191 S--------DEIKSLAEKL-------LHNPLEIEVARRNTASE-----QVSQLVHFVDKK 230

Query: 251 ISEKLYEKLDRLIQ--THENTLIFTNTRGGAERVLYNLRKRYPEKYDETNSGCHHGSLSK 308
              +L   L ++I     +  L+FT T+ GA  +   L K      D   S   HG+ S+
Sbjct: 231 RKREL---LSQMIGEGNWQQVLVFTRTKHGANHLAEQLNK------DGIRSAAIHGNKSQ 281

Query: 309 EKRLELEEKLKSGNLKFATTSSSLELGIDMPYIDLVVQIGSPKSVKTMLQRIGRAGHGIG 368
             R       KSG ++    +     G+D+  +  VV    P   +  + RIGR G    
Sbjct: 282 GARTRALADFKSGGIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAA 341

Query: 369 KVAKGRIIALDRDELL-ECAVMLKK 392
                 ++ +D  +LL +   +LKK
Sbjct: 342 TGEALSLVCVDEHKLLHDIERLLKK 366