Pairwise Alignments

Query, 81 a.a., ferredoxin family protein from Methanococcus maripaludis S2

Subject, 462 a.a., Ferredoxin hydrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score = 42.7 bits (99), Expect = 4e-09
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%)

Query: 5  IIVDKEKCTGCGKCYDKCP----KGPRIYKKDKDGKYYAFDVSDCHNCKICVAAC 55
          + +D E CTGCG+C + CP     G R       GK +  + + C +C  CVA C
Sbjct: 7  VTIDPELCTGCGRCVETCPVQAIAGSR-------GKAHEIEAAACVSCGRCVATC 54



 Score = 23.5 bits (49), Expect = 0.002
 Identities = 9/16 (56%), Positives = 9/16 (56%)

Query: 45 CHNCKICVAACPVGAI 60
          C  C  CV  CPV AI
Sbjct: 14 CTGCGRCVETCPVQAI 29