Pairwise Alignments

Query, 81 a.a., ferredoxin family protein from Methanococcus maripaludis S2

Subject, 658 a.a., CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein from Methanococcus maripaludis JJ

 Score = 45.4 bits (106), Expect = 8e-10
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 3   VEIIVDKEKCTGCGKCYDKCPKGPRIYKKDKDGKYYAF-DVSDCHNCKICVAACPVGAIQ 61
           +   V++E C GC  C   CP     Y+ +KDG   A  D   C  C  C AACP GA+Q
Sbjct: 575 IRATVNEEVCGGCKVCALMCPYNAITYE-EKDGHLVAITDDVACKGCGACAAACPSGAMQ 633

Query: 62  VNLKR 66
           +   R
Sbjct: 634 LRYYR 638



 Score = 34.7 bits (78), Expect = 1e-06
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 14/81 (17%)

Query: 7   VDKEKCTGCGKCYDKCP--------------KGPRIYKKDKDGKYYAFDVSDCHNCKICV 52
           VD++ CTGCG C   CP              K   +         Y  D   C +C +C 
Sbjct: 241 VDEDTCTGCGACAAACPIEVPNEFDLGLGTRKAIYVPFPQAVPLLYTIDKEHCIDCGLCA 300

Query: 53  AACPVGAIQVNLKRHILEKQV 73
             C   A++ + K   L  +V
Sbjct: 301 KVCCAEAVRYDQKPQELNIKV 321