Pairwise Alignments

Query, 81 a.a., ferredoxin family protein from Methanococcus maripaludis S2

Subject, 654 a.a., CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein from Methanococcus maripaludis JJ

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 3   VEIIVDKEKCTGCGKCYDKCPKG-PRIYKKDKDGKYYAFDVSD-CHNCKICVAACPVGAI 60
           + + +D+  C  CG C  +CP G PR    +KDGK  A  +S  C  C  C A CP GA+
Sbjct: 575 IVVTIDENVCGACGICVQQCPYGAPRFV--EKDGKVVAEVLSALCKGCGTCAAGCPSGAL 632

Query: 61  QVNLKRHILEKQVH 74
           +   + H    Q++
Sbjct: 633 E---QSHFKTSQIY 643



 Score = 42.7 bits (99), Expect = 5e-09
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 14/81 (17%)

Query: 7   VDKEKCTGCGKCYDKCPKG------------PRIYKKDKDG--KYYAFDVSDCHNCKICV 52
           + +EKCTGCG C + CP                IYK         Y  D   C +C +C 
Sbjct: 241 LSEEKCTGCGSCEEVCPISVPNEFDMGIGLRKAIYKPFPQAVPAKYTIDKESCIDCGLCA 300

Query: 53  AACPVGAIQVNLKRHILEKQV 73
             C   AI    K  I+E +V
Sbjct: 301 KVCGPQAIDYGQKPEIIEAEV 321