Pairwise Alignments

Query, 713 a.a., RNA-binding transcriptional accessory protein from Methanococcus maripaludis S2

Subject, 568 a.a., ribosomal protein S1 from Dechlorosoma suillum PS

 Score = 76.3 bits (186), Expect = 4e-18
 Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 1/77 (1%)

Query: 635 LEDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIKHPLDVISVGDIVDVM 694
           L  L+EG  +KG V+NI D+GAF+D+G   DGL HI+++A R ++HP +V++VGD V   
Sbjct: 193 LSTLQEGATVKGIVKNITDYGAFVDLG-GIDGLLHITDLAWRRVRHPSEVLAVGDEVTAK 251

Query: 695 VMDIDFDKKRVSLSIKR 711
           V+  D +K RVSL +K+
Sbjct: 252 VLKFDTEKNRVSLGLKQ 268



 Score = 61.2 bits (147), Expect = 1e-13
 Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 3/73 (4%)

Query: 641 GMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIK--HPLDVISVGDIVDVMVMDI 698
           G  L G V N+ D+GAF++I    +GL H+SE+ D   K  HP  V+ +GD V+VM+++I
Sbjct: 284 GTRLFGKVTNLTDYGAFVEIEQGIEGLVHVSEM-DWTNKNVHPTKVVQLGDEVEVMILEI 342

Query: 699 DFDKKRVSLSIKR 711
           D D++R+SL +K+
Sbjct: 343 DEDRRRISLGMKQ 355



 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 639 KEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIA-DRFIKHPLDVISVGDIVDVMVMD 697
           K+G  + G +++I DFG FI +  + DGL H+S+++     +  +     GD V  +V+ 
Sbjct: 369 KKGDKVSGQIKSITDFGVFIGLPGNIDGLVHLSDLSWSTTGEEAIRNFKKGDEVQAVVLA 428

Query: 698 IDFDKKRVSLSIKR 711
           ID DK+R+SL IK+
Sbjct: 429 IDTDKERISLGIKQ 442