Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 440 a.a., ribosomal RNA small subunit methyltransferase RsmB from Pseudomonas stutzeri RCH2

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 8/228 (3%)

Query: 7   IRVNTLKISSEELKTRLEEKGVNLEDTFLDYVFRVVKSPFSMGSTPEYLLGYYFLQSISS 66
           +RVN  ++S +     L+  G+             + +P  +   P +  G   +Q  ++
Sbjct: 173 LRVNRRQVSRDGYLAELQGAGIEAHPCEFSEDGIRLAAPCDVHQLPGFAEGRVSVQDEAA 232

Query: 67  IIPSITLNPSKDDEVLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSLRSNINRMG 126
            + +  L+ +    VLD C APGGKT HL +       ++A+++   RL  +R N+ R+ 
Sbjct: 233 QLAASLLDLAPGQRVLDACCAPGGKTCHLLEREPQLAGLVALDLEPKRLLRVRENLERLH 292

Query: 127 FKNTLMINTNAVN---IDKKLRFDKILLDAPCTGNEV----KDSNRVKTKRDILFCAKRQ 179
            +  L+ +         D K  F +ILLDAPC+   V     D    +   DI   A  Q
Sbjct: 293 LQAELVADDARATERWWDGK-PFQRILLDAPCSATGVIRRHPDIKLTRQADDIAPLAALQ 351

Query: 180 VELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIEL 227
            E+       L+ GG L+Y+TCS    E+ +++   L+       ++L
Sbjct: 352 GEMLDALWPTLEVGGVLLYATCSVLPTENREVIAAFLERTPGARELDL 399