Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 12/244 (4%)

Query: 6   FIRVNTLKISSEELKTRLEEKGVNLEDTFLDYVFRVVKSPFSMGSTPEYLLGYYFLQSIS 65
           ++RVN    +  E +  LE+ G+             +++P  +   P +  G+  +Q  +
Sbjct: 172 WLRVNHQHHTRAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAA 231

Query: 66  SIIPSITLNPSKDDEVLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSLRSNINRM 125
           + +    L P   + +LD CAAPGGKT H+ +    E  ++A++ ++ RLK +R N+ R+
Sbjct: 232 AQLALTYLAPQAGELILDCCAAPGGKTAHILE-RTPESQVVAIDCDETRLKRVRENLQRL 290

Query: 126 GFKNTLMINTNAVNIDKKL----RFDKILLDAPCTGNEV----KDSNRVKTKRDILFCAK 177
             + T  +        ++     +FD+ILLDAPC+   V     D   ++   DI   A+
Sbjct: 291 --ELTAQVICGDARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAE 348

Query: 178 RQVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIELTVDDFPGINM 237
            Q E+     + LK GG LVY+TCS   +E+   V+  L+   +  L+  +    PG  +
Sbjct: 349 LQREILDAMWQQLKPGGSLVYATCSITPQENRLQVKAFLERTPDARLVG-SEPAQPGRQI 407

Query: 238 IEGE 241
           + GE
Sbjct: 408 LPGE 411