Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 467 a.a., rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) from Shewanella amazonensis SB2B

 Score =  130 bits (327), Expect = 5e-35
 Identities = 93/270 (34%), Positives = 140/270 (51%), Gaps = 14/270 (5%)

Query: 7   IRVNTLKISSEELKTRLEEKGVNLEDT--FLDYVFRVVKSPFSMGSTPEYLLGYYFLQSI 64
           IRVNTLKI+S+ L+  LE +G   E      D  +  V      G+  E+  G +++Q  
Sbjct: 37  IRVNTLKITSDALRAILEPRGWQFEPVPWCEDGFWVTVPDDCQPGNLTEHYQGLFYIQEA 96

Query: 65  SSIIPSITLNPSKDDE--VLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSLRSNI 122
           SS++P   L   K+    +LD+ +APG KTT LA LM N+G I+A E + +R K+L +N+
Sbjct: 97  SSMMPPCALFMDKEPRQLLLDVASAPGSKTTQLAALMHNQGLIIANEYSASRTKALHANL 156

Query: 123 NRMGFKNTLMINTNAVNIDKKL--RFDKILLDAPCTGNEVKDSNRVKTKR----DILFCA 176
            RMG  N  +   +       L    D I LDAPC+G      + +  K     +I   A
Sbjct: 157 QRMGVANVAITQFDGRVFGAHLYETLDAIQLDAPCSGEGTVRKDPLSLKNWCPDEIEAIA 216

Query: 177 KRQVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIELTVDDFPGIN 236
           + Q +L  +A + LK GG LVYSTC+    E+ED+  ++ +   +  + E   D F G +
Sbjct: 217 ELQRDLIDSAFQALKPGGVLVYSTCTLNRRENEDVCHFLKERYGDAVVFESLNDLFKGAD 276

Query: 237 MIEGEVKGTLKVIP---PNEPFFIAKFRKT 263
               E +G L + P    +E FF+A+ RKT
Sbjct: 277 KALTE-EGFLHIWPQIYDSEGFFVARIRKT 305