Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 450 a.a., transcription antitermination factor NusB from Rhodopseudomonas palustris CGA009

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 47  SMGSTPEYLLGYYFLQSISSIIPSITLNPSKDDEVLDMCAAPGGKTTHLAQLMENEGSIL 106
           S+   P +  G +++Q  ++ +P+          V D+CAAPGGKT   AQL      + 
Sbjct: 221 SVRMLPGFDEGQWWVQDAAAALPARLFGDIAGKSVADLCAAPGGKT---AQLAAAGARVT 277

Query: 107 AVEINKNRLKSLRSNINRMGFK-NTLMINTNAVNIDKKLRFDKILLDAPCTGNEV----K 161
           A++ +  R+  LR N+ R+  K  T + +      D    FD +L+DAPC          
Sbjct: 278 AIDRSPARVARLRENLARLSLKVETGVADAAEWRGDATAEFDAVLIDAPCASTGTIRRHP 337

Query: 162 DSNRVKTKRDILFCAKRQVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKN 221
           D   +K + DI   A  Q  L + A  +L+ GG LVY TCS E EE E  +  +L    +
Sbjct: 338 DVAWLKQESDIGALAAVQNRLLKKAASLLRPGGTLVYCTCSLEPEEGEQAIAALLDAESS 397

Query: 222 MELIELTVDDFPGINMIEGEVKGTLKVIPPNEP 254
           M    +   +  G+  I     G L+ +P + P
Sbjct: 398 MRRQPIDPAEVAGLAEIV-TTDGALRTLPCHLP 429