Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 475 a.a., Fmu (Sun) domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 23/266 (8%)

Query: 8   RVNTLKISSEELKTRLEEKGVNLEDTFLDYVFRVVKSPFSMGSTPEYLLGYYFLQSISSI 67
           R+  + ++  + K   +E   +  D F D +    KS  ++ +   Y  G   +Q + S 
Sbjct: 213 RLQGISLAKAKAKLAQQEIEASGSDYFKDAINLGHKS-INLNAVALYNEGKLEIQDLGSQ 271

Query: 68  IPSITLNPSKDDEVLDMCAAPGGKTTHLAQLM-----ENEGSILAVEINKNRLKSLRSNI 122
           +      P  D+   D C+  GGK+  L  LM     E  GS++A +I +  L+ L    
Sbjct: 272 VIGNICAPKADETWWDACSGAGGKSLQLRSLMLQQDSEASGSVVASDIRRKPLEELTKRA 331

Query: 123 NRMGFK--NTLMINTNAVNIDKKLRFDKILLDAPC----TGNEVKDSNRVKTKRDILFCA 176
            R GF   +T    ++A+ +     FD +L+DAPC    T     D   +     I   A
Sbjct: 332 KRAGFSQISTQPWQSDALPVAAGY-FDGVLVDAPCSCTGTWRRNPDMRWLDDASAITDKA 390

Query: 177 KRQVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIELTVDDFPGIN 236
             Q+++   A E ++ GG LVY+TCS    E++++V   L    +  L  LT       +
Sbjct: 391 SLQLDILSRACEAVRPGGVLVYATCSISPVENQEVVEAFLAKRPDFSLQTLT-------H 443

Query: 237 MIEGEVKGTLKVIP---PNEPFFIAK 259
               EV   L V+P    ++  F+AK
Sbjct: 444 PFTNEVTQMLTVLPYQADSDGMFVAK 469