Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS

 Score = 80.5 bits (197), Expect = 6e-20
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 12/217 (5%)

Query: 7   IRVNTLKISSEELKTRLEEKGVNLEDTFLDYVFRVVKSPFSMGSTPEYLLGYYFLQSISS 66
           +RVN  + S EE + RL+  G+      L     +++ P  + + P +  G+  +Q   +
Sbjct: 197 LRVNLARGSREEYQARLDAAGIAAVP--LGSAALLLQKPVPVDALPGFFDGFVSVQDWGA 254

Query: 67  IIPSITLNPSKDDEVLDMCAAPGGKTTHLAQLMENEG-SILAVEINKNRLKSLRSNINRM 125
              +  L+      VLD CAAPGGKT H   ++E  G  +LA++++  R + +  N++R+
Sbjct: 255 QRAAELLDARAGQRVLDACAAPGGKTAH---ILEQAGVDLLALDMDGLRCRRVEENLSRL 311

Query: 126 GFKNTLMINTNAVNID--KKLRFDKILLDAPCTGNEV----KDSNRVKTKRDILFCAKRQ 179
           G +  +         D      FD+IL D PC+ + V     DS  ++ + DI   A+ Q
Sbjct: 312 GLRAVVRAADARCPDDWWDGRPFDRILADVPCSASGVVRRHPDSKWLRRETDIAQFARVQ 371

Query: 180 VELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYIL 216
            ++       L  GG L+Y+TCS   EE+   V   L
Sbjct: 372 RQILEVLWPTLAVGGRLLYATCSVFPEENSQQVSAFL 408