Pairwise Alignments

Query, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis S2

Subject, 474 a.a., NOL1/NOP2/sun family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (327), Expect = 5e-35
 Identities = 93/272 (34%), Positives = 146/272 (53%), Gaps = 14/272 (5%)

Query: 7   IRVNTLKISSEELKTRLEEKGVNLEDT--FLDYVFRVVKSPFSMGSTPEYLLGYYFLQSI 64
           IRVNTLKISSE+ K  ++ KG   E      D  +        +G+  E++ G +++Q  
Sbjct: 37  IRVNTLKISSEDFKRLMQPKGWTFEPIPWCKDGFWISYDEEEQLGNALEHIQGLFYIQEA 96

Query: 65  SSIIPSITL-NPSKDDE-VLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSLRSNI 122
           SS++P   L  P+ D + VLD+ AAPG KTT +A LM N+G ++A E + +R+K L +N+
Sbjct: 97  SSMLPPTALFTPNADWQCVLDLAAAPGSKTTQMAALMNNQGLLVANEYSASRVKVLHANV 156

Query: 123 NRMGFKNTLMINTNAVNIDKKL--RFDKILLDAPCTGNEV--KDSNRVK--TKRDILFCA 176
            RMG  +  + + +     + L   FD +L+DAPC G     KD + +K  +  +++  +
Sbjct: 157 LRMGASHCALTHFDGRVFGEYLYESFDAVLIDAPCGGEGTVRKDVDALKSWSLDEVIAIS 216

Query: 177 KRQVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIELTVDDFPGIN 236
           + Q  L  +A   LK GG LVYSTC+    E++ +  Y+ +T  N    E     F G +
Sbjct: 217 ETQKALIESAFLALKPGGSLVYSTCTLNRHENQGVCEYLQQTYGNAVQFESLSQLFDGAD 276

Query: 237 MIEGEVKGTLKVIP---PNEPFFIAKFRKTKN 265
                 +G L V P    +E FF+AK  KT++
Sbjct: 277 KAT-TPEGFLHVWPQIYDSEGFFVAKLTKTRS 307