Pairwise Alignments

Query, 392 a.a., redox-regulated ATPase YchF from Methanococcus maripaludis S2

Subject, 366 a.a., GTP-binding and nucleic acid-binding protein YchF from Pseudomonas fluorescens FW300-N1B4

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 103/377 (27%), Positives = 160/377 (42%), Gaps = 76/377 (20%)

Query: 5   GLVGKPNVGKSTTFNAMTEKIADIGNYPFTTINPNIGTSFVTKPCPCDTLNLKCTPNNSK 64
           G+VG PNVGKST FNA+T+      N+PF TI PN G      P P   L       N K
Sbjct: 6   GIVGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNTG----IVPMPDPRLEALAAIVNPK 61

Query: 65  CFSGMRYIP--VEVIDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVVDASGKTDLEGNP 122
                R +P  +E +D+AGLV  A KG+G+GNKFL ++R+ DA   VV      ++  + 
Sbjct: 62  -----RILPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVI-HV 115

Query: 123 SENNDPVEDVKFLLNELDMWIHGILTKNWERLSRKAQ---QEKNLLKALSEQLSGLNISE 179
           S + DP  D++ +  EL         K  ++++R A+   ++  + KAL EQL       
Sbjct: 116 SNSVDPKRDIEIIDLELIFADLDSCEKQLQKVARNAKGGDKDAVVQKALLEQLIA----- 170

Query: 180 NQVFAVIKEFDESPMKWTEEDLINVSTNLRKASKPMIIAANKADHPDAEKN-----IEKL 234
              F + K           +D   +       +KP++  AN A+  D  +N     I K 
Sbjct: 171 --HFTLGKPARTLMKNMGADDKAVIRGFHLLTTKPVMYIANVAE--DGFENNPLLDIVKA 226

Query: 235 KEEFKDFLVIPTSAEIELALKNAQKAGLIKYDGKSMEV------LDESSLNDAQKNALNY 288
             E +  +V+P   +IE  +   +       DG+  ++      L+E  LN   +    Y
Sbjct: 227 IAEEEGAMVVPVCNKIEAEIAELE-------DGEEKDMFLEALGLEEPGLNRVIR--AGY 277

Query: 289 MKSYLDKFGGTGIQDLINVAYYDLLDMIVVYPVEDEGKFCDKKGNVLPDAYLVKKGATAK 348
              +L  +   G++++                                 A+ V+ GATA 
Sbjct: 278 EMLHLQTYFTAGVEEV--------------------------------RAWTVRVGATAP 305

Query: 349 DLAFKIHTEIGQKFIYA 365
             A  IHT+  + FI A
Sbjct: 306 QAAGVIHTDFEKGFIRA 322