Pairwise Alignments

Query, 392 a.a., redox-regulated ATPase YchF from Methanococcus maripaludis S2

Subject, 367 a.a., GTP-dependent nucleic acid-binding protein EngD from Sinorhizobium meliloti 1021

 Score = 90.5 bits (223), Expect = 7e-23
 Identities = 107/378 (28%), Positives = 171/378 (45%), Gaps = 77/378 (20%)

Query: 5   GLVGKPNVGKSTTFNAMTEKIA-DIGNYPFTTINPNIGTSFVTKPCPCDTLNLKCTPNNS 63
           G+VG PNVGKST FNA+T+  A    NYPF TI PN G   V  P       ++   + +
Sbjct: 6   GIVGLPNVGKSTLFNALTKTAAAQAANYPFCTIEPNTGEVAVPDP------RMRKLADIA 59

Query: 64  KCFSGMRYIPVEV--IDVAGLVPDAHKGKGMGNKFLDDLRQADAFILVV---DASGKTDL 118
           K       IP  +  +D+AGLV  A KG+G+GN+FL ++R+ DA + V+   +    T +
Sbjct: 60  K---SKEIIPTRISFVDIAGLVRGASKGEGLGNQFLANIREVDAVVHVLRCFEDDDITHV 116

Query: 119 EG--NPSENNDPVEDVKFLLNELDMWIHGILTKNWERLSRKAQ-QEKNLLKALSEQLSGL 175
           EG  +P E+ D +E  + +L +LD      L +  E+  ++A  ++K  +  L    + L
Sbjct: 117 EGRIHPVEDADTIE-TELMLADLDS-----LERRAEQTRKRATGKDKESMAQLPIMEASL 170

Query: 176 NISE--NQVFAVIKEFDESPMKWTEEDLINVSTNLRKASKPMIIAANKADHPDAEKN--- 230
            + +    V  ++ + D   ++      I  S NL   S P++   N A+   A  N   
Sbjct: 171 KLLQEGKPVRTLLSKLDADELR------ILQSLNL-LTSHPVLYVCNVAESDAATGNEHT 223

Query: 231 --IEKL-KEEFKDFLVIPTSAEIELALKNAQKAGLIKYDGKSMEVLDESSLNDAQKNALN 287
             +EK+ +E+  + +VI  + E E+A    ++A          E L    L +A      
Sbjct: 224 RAVEKMAREQGAETVVISAAIESEVAQLPEEEA---------KEFLAALGLEEA------ 268

Query: 288 YMKSYLDKFGGTGIQDLINVAYYDLLDMIVVYPVEDEGKFCDKKGNVLPDAYLVKKGATA 347
                       G+  LI  A Y LLD+I  + V          G     A+ + +G  A
Sbjct: 269 ------------GLDRLIR-AGYKLLDLITYFTV----------GPKETRAWTIPRGTKA 305

Query: 348 KDLAFKIHTEIGQKFIYA 365
              A  IH++  + FI A
Sbjct: 306 PQAAGVIHSDFERGFIRA 323