Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 951 a.a., BarA sensory histidine kinase (= VarS = GacS) from Pseudomonas fluorescens FW300-N2E2

 Score =  137 bits (344), Expect = 3e-36
 Identities = 98/349 (28%), Positives = 173/349 (49%), Gaps = 29/349 (8%)

Query: 291 SVIQKIFFIAFSSLIIAVFVAVILNKKIVDSIKKLKNSAESFGRGNYDERASIDTGDELE 350
           S+   +  IA + L +   +A+ + + I   + ++K +      G+ + R       EL+
Sbjct: 203 SLFASLLLIA-AGLCLTGLLALRMGRTINRPLSQIKQAVAQLKDGHLETRLPPLGSQELD 261

Query: 351 ELAESFNKMADEIGKSDKKL-----------KSDAHTLKTSFDELK-------EVDNLKS 392
           ELA   N+MA  +  + ++L           + +  T++    EL        E   +KS
Sbjct: 262 ELASGINRMASTLQNAQEELQHSIDQATEDVRQNLETIEIQNIELDLARKEALEASRIKS 321

Query: 393 EILSIVSHELRTPLTAILGYVELLKDETAGKLSEKQKEFISVISENSDRLKRITDNMSDL 452
           E L+ +SHE+RTPL  ILG+  LL+     +L+ +Q +++  I +++D L  I + + D 
Sbjct: 322 EFLANMSHEIRTPLNGILGFTHLLQKS---ELTPRQLDYLGTIEKSADSLLGIINEILDF 378

Query: 453 VTVDNKILDIKRDRINLKKEVNDILRSFDYFAESKNIVLLEDVDN---LDIKGDKSKIHQ 509
             ++   L +     NL+  + D L      A +K + L+  V     L + GD  ++ Q
Sbjct: 379 SKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLSLVGDPLRLKQ 438

Query: 510 VLSNLIENAIKFSKKQTKVTVMGFEDKGN----IHLEITDQGPGIPKEHLGKIFDKFYQI 565
           +L+NL+ NAIKF+++ T V     ED+      + + I D G G+  + +  +F  F Q 
Sbjct: 439 ILTNLVSNAIKFTREGTIVARAMLEDEHEDSVQLRISIQDTGIGLSNQDVRALFQAFSQA 498

Query: 566 DSSSKREVGGSGLGLAVCKKIVESHGGSIWVESKIGKGTTVHVMFPLIK 614
           D+S  R+ GG+GLGL + K++VE  GG I V+S  G+G+   +   L K
Sbjct: 499 DNSLSRQPGGTGLGLVISKRLVEQMGGEIGVDSTPGEGSEFWISLRLPK 547