Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 754 a.a., GAF sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score =  141 bits (355), Expect = 1e-37
 Identities = 78/263 (29%), Positives = 145/263 (55%), Gaps = 4/263 (1%)

Query: 353 AESFNKMADEIGKSDKKLKSDAHTLKTSFDELKEVDNLKSEILSIVSHELRTPLTAILGY 412
           A+ + ++ D+    + ++      L  +    +  +  K E L+ +SHELRTPLT ++G 
Sbjct: 346 AQLYGQLQDQTQTLENRVLERTQELIDALALAQAANAAKGEFLATMSHELRTPLTCVIGM 405

Query: 413 VELLKDETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVTVDNKILDIKRDRINLKKE 472
              L     G L+E+Q+E+I  I ++ + L  + +++ DL  ++     ++    +L + 
Sbjct: 406 SSTLLRWAFGPLTERQREYIKAIHDSGEHLLELINDILDLSQIEAGKAALQVRPFSLSRL 465

Query: 473 VNDILRSFDYFAESKNIVLLEDV---DNLDI-KGDKSKIHQVLSNLIENAIKFSKKQTKV 528
               L +    A    I L+ D+   + +D+ + D  ++ Q+L NL+ NA+KF++ Q  V
Sbjct: 466 ATQTLNTLQEKARLGEIQLMLDLQLNNRVDVFRADPKRLRQILINLLSNAVKFTEPQGTV 525

Query: 529 TVMGFEDKGNIHLEITDQGPGIPKEHLGKIFDKFYQIDSSSKREVGGSGLGLAVCKKIVE 588
            +  + +      +++D G GIP+    ++F KF Q+D+S +R+ GG+GLGLA+ K++VE
Sbjct: 526 FLRVWREGDRAIFQVSDTGIGIPESEQAQLFQKFQQLDTSIRRQYGGTGLGLALTKQLVE 585

Query: 589 SHGGSIWVESKIGKGTTVHVMFP 611
            HGG I +ES +G+G+T  V  P
Sbjct: 586 LHGGHIQIESTVGQGSTFTVWIP 608