Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 1041 a.a., Periplasmic Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  140 bits (354), Expect = 2e-37
 Identities = 92/327 (28%), Positives = 166/327 (50%), Gaps = 16/327 (4%)

Query: 296 IFFIAFSSLIIAVFVAVI-LNKKIVDSIKKLKNSAESFGRGNYDERASIDTGDELEELAE 354
           +F++ F + +   ++ V  ++ ++   +  L         G+Y + A      EL+E   
Sbjct: 412 VFYLGFLAFL---YIRVREMSVRLSGPLSALNAMIRRIASGSYFQTAPAFDVRELDETGR 468

Query: 355 SFNKMADEIGKSDKKLKSDAHTLKTSFDELKEVDNLKSEILSIVSHELRTPLTAILGYVE 414
               M D +G+++++L ++   L  + D  +     K+E L+ +SHE+RTP+ A++G   
Sbjct: 469 EVAAMGDRLGRANEELIANREELVRARDAAQAAARAKAEFLATMSHEIRTPMNAVIGMTG 528

Query: 415 LLKDETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVTVDNKILDIKRDRINLKKEVN 474
           LL D   G L  +Q ++   I  + + L  + +++ D   +D   L +     +L  EV 
Sbjct: 529 LLLD---GPLEPRQIDYARTIQRSGEHLLGLINDILDFSRIDTGRLVLVDRDFSLSHEVQ 585

Query: 475 DILRSFDYFAESKNIVLLEDVDNL---DIKGDKSKIHQVLSNLIENAIKFSKKQTKVTVM 531
            ++      A +K + +  D+D       +GD  ++ Q+L NL+ NA+KF+ K   VTV 
Sbjct: 586 AVVSLCGVAASAKRLSVRIDLDRALAPGYRGDSQRLRQILVNLVGNAVKFTDKGM-VTVQ 644

Query: 532 G--FEDKGNIH---LEITDQGPGIPKEHLGKIFDKFYQIDSSSKREVGGSGLGLAVCKKI 586
           G   + + +IH   L + D G GIP+E    +F  F Q+D S+ R  GG+GLGLA+ +K+
Sbjct: 645 GDVLKIENDIHWLRLRVVDTGCGIPRERFNDLFAAFQQLDGSATRTHGGTGLGLAISRKL 704

Query: 587 VESHGGSIWVESKIGKGTTVHVMFPLI 613
               GG I V S  G+G+   V+ P++
Sbjct: 705 ARLMGGDITVSSTPGEGSVFSVVVPMV 731