Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis JJ

 Score =  462 bits (1188), Expect = e-134
 Identities = 261/632 (41%), Positives = 391/632 (61%), Gaps = 29/632 (4%)

Query: 6   IGMIGTKLLIFSIIIVLIPIVMMSYVSTDTISDLMTSNQESELDINLGILNERMDSVLVE 65
           I  +GTKL+I+SII  LIPIVM+  VSTDTI+  MT   + +++ +L      ++  L +
Sbjct: 7   IKRLGTKLIIYSIITALIPIVMLGAVSTDTINTEMTKQAQEKINDDLNTAESVVNLKLDK 66

Query: 66  FDTMTAYTADLPVVVNAVKNNDKDTLQDFANGLEDQSWIDLAVFTDADGNVICASYGD-- 123
             ++  Y       +N +KNND   L+  A   ++ S  D  VF D  GNV+  S  D  
Sbjct: 67  ISSLNKYIISNEKTINILKNNDTKELKTLAISYKNTSAPDFVVFFDGQGNVVARSNSDVT 126

Query: 124 -DNAEISSYVK----------KLLEKNTI--------YAYDILPNEEASKYSEYELDGND 164
            DN+    + K          ++L+K++I           DI   +++  YS+   D   
Sbjct: 127 GDNSYEDLFKKVVNSTGYTSIEVLDKDSIKYENVGELVNIDIKGTDDSIDYSDSVQDS-- 184

Query: 165 ALTIFTVAPIYDGNS-LIGTVTYVDIMNKDDYWVDRVKEVTGDEASIYLNNVRISTTCIK 223
           A+ + ++ PIYD N  L+G     DI+NKD   VD VK+ + D  +I+L+ VR+ST    
Sbjct: 185 AMALVSIEPIYDKNGKLLGAAMAADILNKDYSIVDTVKDASKDATTIFLDGVRVSTNVQD 244

Query: 224 DGVDFVGELADEDIYETV---SKKQDVRSTVTINGVPYLAKYSPIYNIDGEVIGMTCVGT 280
           +G   +G L  +++Y  V    K    R+ V      YL  Y PIY+ D E+IGM  VGT
Sbjct: 245 NGGRAIGTLVSKEVYNHVVLDGKTYYGRAFVVNEW--YLTAYEPIYDSDNEIIGMLFVGT 302

Query: 281 PKSPFTALLNSVIQKIFFIAFSSLIIAVFVAVILNKKIVDSIKKLKNSAESFGRGNYDER 340
           P+S F AL  +V  + F +    L+IA+ V+ ++N+ I+  +++LK  AE    G YD++
Sbjct: 303 PESKFLALQANVRNQTFVVGLIGLLIALIVSYLINRGIIKPLEQLKQGAEWVSNGRYDQK 362

Query: 341 ASIDTGDELEELAESFNKMADEIGKSDKKLKSDAHTLKTSFDELKEVDNLKSEILSIVSH 400
             +D+ DE  ELA++FNKMA +I  SD+KLK  A  LKTS++ELKE+D LKSE+++IVSH
Sbjct: 363 VIVDSDDEFGELAKAFNKMATQINISDEKLKKHAEELKTSYNELKELDKLKSELIAIVSH 422

Query: 401 ELRTPLTAILGYVELLKDETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVTVDNKIL 460
           ELRTPLT+I GYVEL+ D T G +++ QK+ + V  +N  RL+R+ ++M DL  ++   L
Sbjct: 423 ELRTPLTSIKGYVELVLDGTMGTINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGEL 482

Query: 461 DIKRDRINLKKEVNDILRSFDYFAESKNIVLLEDVDNLDIKGDKSKIHQVLSNLIENAIK 520
           ++ R+++NL+  V D++      A  KNI L ++V+++ I+ DK +I QVL+NLIENAIK
Sbjct: 483 EMYREKVNLRAIVCDVIEYLKPLATEKNIKLNKEVEDIAIEADKDRITQVLTNLIENAIK 542

Query: 521 FSKKQTKVTVMGFEDKGNIHLEITDQGPGIPKEHLGKIFDKFYQIDSSSKREVGGSGLGL 580
           FS     + V G  +  +IHL++TD+G GIPK+ + KIF++FYQ+DSS+KR+ GGSGLGL
Sbjct: 543 FSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGL 602

Query: 581 AVCKKIVESHGGSIWVESKIGKGTTVHVMFPL 612
           AVCK IVE+H GSIWVES++GKG+T H++ P+
Sbjct: 603 AVCKSIVEAHKGSIWVESELGKGSTFHIILPI 634