Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis JJ

 Score =  325 bits (833), Expect = 4e-93
 Identities = 183/501 (36%), Positives = 284/501 (56%), Gaps = 37/501 (7%)

Query: 9   IGTKLLIFSIIIVLIPIVMMSYVSTDTISDLMTSNQESELDINLGILNERMDSVLVEFDT 68
           IGTK+L+F I+  +IP++++  VSTD IS+ M    E+ +D NL IL E ++++  EF+T
Sbjct: 8   IGTKILVFMILCAVIPLMIVGGVSTDKISNEMEIQGENSVDFNLKILEETINNIQSEFET 67

Query: 69  MTAYTADLPVVVNAVKNNDKDTLQDFANGLEDQSWIDLAVFTDADGNVICASYGDDNAE- 127
            T YTA+L VV +A+ NND   L +FA  +++ S +DL  FTD DGN+I +S   DN + 
Sbjct: 68  TTDYTANLDVVSDAISNNDNGILLNFAENMKESSEVDLIAFTDKDGNIISSS---DNTQT 124

Query: 128 -ISSYVKKLLEKNTIYAYDILPNEEASKYSEYELDG-NDALTIFTVAPIYDGNSLIGTVT 185
            +   V KLL      ++ I+   EASKYS+Y++D  NDAL +  VAP+Y+   L+G+VT
Sbjct: 125 NLKPIVSKLLGNEVQSSFLIISGAEASKYSDYKVDKTNDALALCAVAPVYNSGKLVGSVT 184

Query: 186 YVDIMNKDDYWVDRVKEVTGDEASIYLNNVRISTTCIKDGVDFVGELADEDIYETVSKKQ 245
            VDI+NKDD WVDRVK+VTG+EA+I+L NVRISTT   +G D  G  A E++Y      Q
Sbjct: 185 LVDIVNKDDQWVDRVKQVTGNEATIFLKNVRISTTVQTNGRDATGTTASEEVYTKSLNHQ 244

Query: 246 DVRSTVTINGVPYLAKYSPIYNIDGEVIGMTCVGTPKSPFTALLNSVIQKIFFIAFSSLI 305
           +   T T+ G  Y+ KYSPI +I+G V+GM  VGTP+ PF A++N +  +I  +A + L+
Sbjct: 245 EHVGTATVLGQSYITKYSPIEDIEGNVVGMIFVGTPEGPFLAVINGIRNQIIIVAIAGLL 304

Query: 306 IAVFVAVILNKKIVDSIKKLKNSAESFGRGNYDERASIDTGDELEELAESFNKMADEIGK 365
           +++ +A+   +KI   I++LK     FG GNYD + ++ TGDEL+EL++SFN MA  I  
Sbjct: 305 LSILIALYTGRKITKPIEELKKGTSEFGNGNYDYKTNVKTGDELQELSDSFNGMAGNIKN 364

Query: 366 SDKKLKSDAHTLKTSFDELKEVDN--LKSEILSIVSHELRTPL------TAILGYVELLK 417
             K +  D   L    + +  V N   K +  +                TA+    +L+K
Sbjct: 365 LMKTMDMDKVELANLLNNVTNVMNNVAKGDFTARADENTENNTLQKAINTAVANVAQLIK 424

Query: 418 D-----------------------ETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVT 454
           D                       ETA +++E   +     S+ S +L+  +D + +   
Sbjct: 425 DLREEVDLLNIQVQKVEDELKSAEETATQVTEAATQVAEASSDQSSKLQEASDQLENTYG 484

Query: 455 VDNKILDIKRDRINLKKEVND 475
           V  ++     + +   +E+++
Sbjct: 485 VAKEVYSAAEETVKSAEEISE 505