Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis S2

Subject, 491 a.a., sensor kinase CusS (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (328), Expect = 1e-34
 Identities = 91/302 (30%), Positives = 155/302 (51%), Gaps = 31/302 (10%)

Query: 303 SLIIAVFVAVILNKKIVDSIKKLKNSAESFGRGNYDERAS-IDTGDELEELAESFNKMAD 361
           SL+I + + + + +  +  ++ + N+ +S    N D R        ELE+L  SFN M  
Sbjct: 196 SLLIVLIIRIAVRQGHLP-LRNVSNAIKSITSENLDTRLEPTRVPIELEQLVISFNHM-- 252

Query: 362 EIGKSDKKLKSDAHTLKTSFDELKEVDNLKSEILSIVSHELRTPLTAILGYVELLKDETA 421
            IGK +     D  T + +F              + ++HE+RTP+T ++   E+   +  
Sbjct: 253 -IGKIE-----DVFTRQANFS-------------ADIAHEIRTPITNLVTQTEIALSQ-- 291

Query: 422 GKLSEKQKEFISVISENSDRLKRITDNMSD---LVTVDNKILDIKRDRINLKKEVNDILR 478
                 QKE   V+  + +   R+T  +SD   L   DN  L   R R +L+ EV  +  
Sbjct: 292 ---DRTQKELEDVLYSSLEEYNRMTKMVSDMLFLAQADNNQLIPDRVRFDLRAEVMKVFE 348

Query: 479 SFDYFAESKNIVLLEDVDNLDIKGDKSKIHQVLSNLIENAIKFSKKQTKVTVMGFEDKGN 538
            F+ +AE +NI L  +     ++GD     + ++NL+ NA++++ +   +TV   E +  
Sbjct: 349 FFEAWAEERNITLKFNGMPCLVEGDPQMFRRAINNLLSNALRYTPEGQAITVSIREQESF 408

Query: 539 IHLEITDQGPGIPKEHLGKIFDKFYQIDSSSKREVGGSGLGLAVCKKIVESHGGSIWVES 598
             L I + G  IP+EHL ++FD+FY++D S +R+  GSG+GLA+ K IVE+H G + VES
Sbjct: 409 FDLVIENPGKPIPEEHLSRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVEAHHGRVQVES 468

Query: 599 KI 600
            +
Sbjct: 469 DV 470