Pairwise Alignments

Query, 312 a.a., transketolase family protein from Methanococcus maripaludis S2

Subject, 647 a.a., 1-deoxy-D-xylulose 5-phosphate synthase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  142 bits (359), Expect = 2e-38
 Identities = 93/304 (30%), Positives = 161/304 (52%), Gaps = 7/304 (2%)

Query: 9   REAYGETLAELGEVNENIVVLDADLSGSTKTGIFAKKYPERFFNAGIAEQNMMGMAAGLS 68
           ++ +G TL EL E N  IV +   +       I   K P+R F+ GIAE + +  + G++
Sbjct: 329 QDVFGNTLVELAEANPRIVGVTPAMPSGCSMNILMSKMPKRAFDVGIAEGHAVTFSGGMA 388

Query: 69  RTGKTVFASTFAMFATGRAWEQIRNSIAYPGLNVKICATHSGVTVGEDGASHEMTEDIAI 128
           + G   F + ++ F   RA++ I + +A   L V +C   +G+ VGEDG +H    D+A 
Sbjct: 389 KDGLQPFCNIYSSFMQ-RAYDNIIHDVAIQNLPVVLCLDRAGL-VGEDGPTHHGAFDMAY 446

Query: 129 MRAIPKMIVISPSDYLETKSAVRWA-ADYEGPVYVRMPRGNTEIIFEGEEEAKFEFGKAR 187
           +R IP + + SP +  E +  +  A    +GP  +R PRG   ++       +   GK R
Sbjct: 447 LRPIPNLTIASPMNEHELRRLMYTAQLPDKGPFVLRYPRGRGVLVDWKCPLEEIPVGKGR 506

Query: 188 VLKDGTDITLIATGELVPEALNA-SKILSEKGISAQVIAIATIKPIDKDAIKN-SKDF-- 243
            LKDG DI +I+ G +  +A +A ++  SE G S     +  +KP+D++ +    + F  
Sbjct: 507 KLKDGKDIAVISIGPIGNKARSAIARAESESGRSIAHYDLRFLKPLDEELLHEVGRTFRH 566

Query: 244 IVSIEDHSIIGGLGGAISEVIAEDGLNKKLLRVGINDEFGKSGKAGDLLKYYKLDSESIA 303
           IV+IED +I GG+G A+ E +A+      + R+GI D+F + G   +L +   +D +S+ 
Sbjct: 567 IVTIEDGTIQGGMGSAVLEFMADHEYTPTVKRIGIPDKFVQHGTVAELYQLCGMDEDSLT 626

Query: 304 ETVM 307
           + ++
Sbjct: 627 KELL 630