Pairwise Alignments

Query, 362 a.a., ADP-forming succinate--CoA ligase subunit beta from Methanococcus maripaludis S2

Subject, 388 a.a., succinyl-CoA ligase subunit beta from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (589), Expect = 2e-65
 Identities = 136/366 (37%), Positives = 200/366 (54%), Gaps = 23/366 (6%)

Query: 1   MKLHEYEAKEIFKENNIPIPKNKLVSGKVESIDYP-------VVIKAQVLVGGRGKAGGI 53
           M LHEY+AK++F E  +P+P+        E+ +          V+K QV  GGRGKAGG+
Sbjct: 1   MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKAGGV 60

Query: 54  LFADNVDDANEKIESLIGNTV-------KGELVEKVLLEEQIKIVKEYYVGVVVNRNEKN 106
              D  +      +  +G  +        G+ V K+L+EE   I  E Y+G VV+R+ + 
Sbjct: 61  ELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAVVDRSTRR 120

Query: 107 NVVIFSTEGGVDIEEVASKTPEKIIKLSLNPEKEFLPYLARGMLKKAGIPSAEIPKVADV 166
            V + STEGGV+IE+VA +TPE I K +++P      Y  R +  K G+   +I +   +
Sbjct: 121 IVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRELAFKLGLQGDQIKQFVKI 180

Query: 167 LCKVYKAFKNMDGILAEINPLVFTEDGKIIAADAVLNVDDDAYFRHNYEKFEEFNKQE-- 224
              + + F   D  L EINPLV T +G ++  D  +N+D +A +R    +      QE  
Sbjct: 181 FMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPKLRQMHDASQEDA 240

Query: 225 ------KSEFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGNPACFLDVGGGSNRETVKK 278
                 K E  YV LDG++  + NGAGL + +MDIV   GG PA FLDVGGG+ +E V +
Sbjct: 241 REAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300

Query: 279 ALLKATSRKNVKGAFINILGGITRCDEVSMGIVDVLKE-NPNLKFAVRMMGTNEEEGRRI 337
           A     S  NVK   +NI GGI RCD ++ GI+  +KE   ++   VR+ GTN E GR++
Sbjct: 301 AFKIILSDTNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVSVPVVVRLEGTNAELGRKV 360

Query: 338 LSENGI 343
           L+E+G+
Sbjct: 361 LAESGL 366