Pairwise Alignments

Query, 362 a.a., ADP-forming succinate--CoA ligase subunit beta from Methanococcus maripaludis S2

Subject, 709 a.a., succinyl-CoA synthetase, alpha/beta subunit (sucCD) (Chris Hemme) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  154 bits (390), Expect = 5e-42
 Identities = 104/352 (29%), Positives = 180/352 (51%), Gaps = 19/352 (5%)

Query: 1   MKLHEYEAKEIFKENNIPIPKNKL-----VSGKVESIDYPVVIKAQVLVGGRGKAGGILF 55
           M L+E+++K +F+E  I  P+  +     + G +   D P  +KAQVL GGRGKAGG+  
Sbjct: 19  MFLNEHQSKRLFEEAGIETPQGIMTDSAGIEGCLPPFDAPWFVKAQVLAGGRGKAGGVRR 78

Query: 56  ADNVDDANEKIESLIGNTVKGELVEKVLLEEQIKIVKEYYVGVVVNRNEKNNVVIFSTEG 115
           AD++    +  + ++G  + G  V  V +E    I +E YV  +V+R  +  +   S  G
Sbjct: 79  ADDLAGLRDVAKDILGMRIGGHAVPFVRIEPATAIARECYVSFMVSRKRRELLFTASGSG 138

Query: 116 GVDIEEVASKTPEKIIKLSLNPEKEFLPYLARGMLKKAGIPSAEIPKVADVLCKVYKAFK 175
           GV++E     + +  +  ++    E   ++ R      G+         + + +++ A +
Sbjct: 139 GVEVE-----SGQGALVCAVPLTGEMPEHVIRSAFFCIGVGREHWAGFREFVLRLHGAVR 193

Query: 176 NMDGILAEINPLVFTEDGKIIAADAVLNVDDDAY-FRHNYEKFE-------EFNKQEKSE 227
           +   +LAE+NPLV T DG+ +A D  + VDD+    R +  +F        E N   ++ 
Sbjct: 194 DYGLLLAEVNPLVLTGDGRWLALDGKVEVDDNVVDIRPDLLRFHTPEHLAPEENAAREAG 253

Query: 228 FAYVELDGDIAVIGNGAGLTLASMDIVKEFGGNPACFLDVGGGSNRETVKKALLKATSRK 287
            +YVEL G + ++ NGAGL +A+MD++   G   A F+D+GG ++   +++AL       
Sbjct: 254 LSYVELKGWVGLLVNGAGLAMATMDLLNFSGLAAANFMDLGGAADVPRMRRALELLFGNP 313

Query: 288 NVKGAFINILGGITRCDEVSMGIVDVLKENPNLK-FAVRMMGTNEEEGRRIL 338
            V+   +N+ GGI  C  V+  +V+ L +    K   VRM G    EGR++L
Sbjct: 314 QVRVVCVNLFGGIVSCAAVAGALVEALGDGRAAKPVVVRMDGFEAAEGRQLL 365