Pairwise Alignments

Query, 135 a.a., winged helix-turn-helix domain-containing protein from Methanococcus maripaludis S2

Subject, 135 a.a., transcriptional regulator from Methanococcus maripaludis JJ

 Score =  253 bits (645), Expect = 1e-72
 Identities = 127/135 (94%), Positives = 133/135 (98%)

Query: 1   VNNIENVDQKLIENLANLMSSEVRAKIYIYLRKYNKSTVDEIAGGTGIYPSTVRESILDM 60
           +N+IENVDQKLIENLANLMSSEVRAKIYIYLRKYNKSTVDEIAGGTGIYPSTVRESILDM
Sbjct: 1   MNSIENVDQKLIENLANLMSSEVRAKIYIYLRKYNKSTVDEIAGGTGIYPSTVRESILDM 60

Query: 61  YNTGYVSREKMDKEGLGKKPYLYTAAAPSEIVRKISKNIQEKLNDLIMVDRRIESKELKI 120
           YNTGYVSREKMDKEGLGKKPYLYTAAAPS IV+KISKNIQEKLNDLIMVD+R+ESKELKI
Sbjct: 61  YNTGYVSREKMDKEGLGKKPYLYTAAAPSYIVKKISKNIQEKLNDLIMVDKRLESKELKI 120

Query: 121 PFVPVKIVVDEKYRD 135
           PFVPV+IVVDEKY D
Sbjct: 121 PFVPVRIVVDEKYND 135