Pairwise Alignments

Query, 291 a.a., phosphate ABC transporter permease subunit PstC from Methanococcus maripaludis S2

Subject, 752 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (313), Expect = 4e-33
 Identities = 64/175 (36%), Positives = 104/175 (59%)

Query: 116 PSVVYGFVGMVLLVPLIRDVFNTNPGYSWLAASIILGIMIVPTITVLSEDAINSVPQQLK 175
           PS+   F G    + +  ++  T    + L   I +G  ++PTI  ++EDA+ SVP+ L 
Sbjct: 575 PSIEVAFFGGDTRLFITNELGITFDQRNALVVGIAMGFAVIPTIFSIAEDAVFSVPRHLS 634

Query: 176 EGSLAMGATRWQTIKKVVLPASLSGILSGVILGMGRAIGETMAVLMVAGNWPLIPKSIFD 235
            GSLA+GAT WQT+ +VVL  +  GI S V++G+GRA+GETM VLM  GN  ++  S+F+
Sbjct: 635 NGSLALGATNWQTLTRVVLLTASPGIFSAVMMGLGRAVGETMIVLMATGNTAIMEWSVFE 694

Query: 236 PVRPLTSHIILNIKEAASGSPIYYAMFATGLVLFVMVLSLNLISHYINKKYKIKW 290
            +R L ++I + + E+A GS  Y  +F    VLF+     N I+  + ++ + ++
Sbjct: 695 GMRTLAANIAVEMPESAIGSSHYRVLFLAAFVLFIFTFLFNTIAEVVRQRLRERY 749



 Score = 58.2 bits (139), Expect = 6e-13
 Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 64  IFPMIVGSFLVTVLALVFSVPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFV 123
           + P+  G+    + A++F+ PL +  A++ A     KV+ +++P+IEI+ A+P+V+ GF+
Sbjct: 446 LMPLAFGTMKAALYAMLFATPLAIAGAVYTAYFMSPKVRAVVKPTIEIMEALPTVILGFL 505

Query: 124 GMVLLVPLIRDVFNTNPGYSWLAASIILGIMI 155
             + L PLI D     PG   L   + + I++
Sbjct: 506 AGLWLAPLIEDHL---PGIIMLLVLLPISILL 534