Pairwise Alignments

Query, 291 a.a., phosphate ABC transporter permease subunit PstC from Methanococcus maripaludis S2

Subject, 290 a.a., phosphate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  223 bits (568), Expect = 4e-63
 Identities = 121/273 (44%), Positives = 178/273 (65%), Gaps = 4/273 (1%)

Query: 14  ILKLSALLSSVIIFAMVLFLILSS-LPVFSVVNPLDFVLGSDWSPINDAYGIFPMIVGSF 72
           IL L   ++ VI  + + + + S  LP       + FVLG +W P    YGI PMI+ S 
Sbjct: 18  ILFLCCAMAGVISVSTIGWFVFSEGLPALKEAGVISFVLGKEWLP-PALYGILPMIIASL 76

Query: 73  LVTVLALVFSVPLGVGCAIFLAELAPKKVQNILRPSIEILTAIPSVVYGFVGMVLLVPLI 132
           + T  A++  VP+ +  AIFLAELAPK + N++RP++E+L  IPSVVYGF G+V++VP I
Sbjct: 77  ISTTGAIIIGVPIAIFTAIFLAELAPKWLANLVRPAVELLAGIPSVVYGFFGLVIIVPGI 136

Query: 133 RDVFNTNPGYSWLAASIILGIMIVPTITVLSEDAINSVPQQLKEGSLAMGATRWQTIKKV 192
             +F+   G + LA  I+L IMI+PTI  +SE ++ ++P   KEG+LA+GA+   TI  V
Sbjct: 137 EAIFDIPAGNTLLAGIIVLAIMILPTIITISETSLRALPSVYKEGALALGASHIYTIFNV 196

Query: 193 VLPASLSGILSGVILGMGRAIGETMAVLMVAGNWPLIPKSIFDPVRPLTSHIILNIKEAA 252
           ++PA+ SGIL+GVILG+ RAIGETMA++MV GN P +P S+ +P R LT++I + +  A 
Sbjct: 197 LVPAAKSGILTGVILGVARAIGETMAIIMVMGNAPAMPGSLLEPARTLTANIAMEMSYAT 256

Query: 253 SGSPIYYAMFATGLVLFVMVLSLNLISHYINKK 285
                  A++ATG+VL   ++ LN    Y+N+K
Sbjct: 257 GIHS--SALYATGIVLLAFIVLLNGSLLYLNRK 287