Pairwise Alignments

Query, 304 a.a., AEC family transporter from Methanococcus maripaludis S2

Subject, 319 a.a., Fatty acid transporter (from data) from Shewanella oneidensis MR-1

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 75/326 (23%), Positives = 146/326 (44%), Gaps = 33/326 (10%)

Query: 1   MIIMEIMYVIVFLILIGYISRHFKILDEKDRMVLNKIVIYIAMPATIFLQLLTNVAPSDL 60
           M I+  ++ +  ++L+G + +  + L  +   VLN+ V YIA PA + + L    A   +
Sbjct: 1   MTILTPLFAVFGIMLLGTLVQKLRFLPVETDQVLNQYVYYIAFPAVLLIAL----AQQPI 56

Query: 61  PEFMKLPIIIFISTAACALLAYIAGKRLKLDNKS---LGGFVLVASIGNTGFLGYPVILG 117
            E ++   I   S A   +     G  L ++ K         L A+ GNT F+G P+++ 
Sbjct: 57  EEILQWRFIAGYSAAMLVIYLMCIGISLLVNPKQHAIAAVRALNATFGNTAFIGIPLLVI 116

Query: 118 FYGEQ--GLLRAIFCDMSAIFCSMLLGTYIGVKLSGAKKS------ILKEVFTFPPLFTG 169
            + EQ   L+ AI   +S +  ++ L   + ++L+  K        I+    T  P+  G
Sbjct: 117 IFPEQQSALVAAIASLLSVLMFAVAL---VSLELTTNKHRQHHAVVIMCLAITKNPIVIG 173

Query: 170 IFTLILV-LLHVNLSIFPEFFTKSLEYMSSATIPLIMLSLGLSLSPKAAKF--------- 219
            F  I +  L + L   P      ++ + + + P  + ++G+ L+ KA ++         
Sbjct: 174 CFIGISISALGITL---PSGVALMIQQIGNTSSPCALFAVGMVLA-KAMRYQKDSKLFSL 229

Query: 220 -GIFYGILASIFRMVISPLVAFPISESILSNQLDKQVTIMQSAMPSAMMPLVYAVIYDLD 278
                  L ++F++++ P + F + +SI        + ++ SA+P+A    + A  Y+  
Sbjct: 230 TNFVELCLINLFKLILQPALVFFMLKSIGVTGDYLVMGVILSALPTAASVYLLAQRYNTQ 289

Query: 279 VKLVASACFVSTVVSLFALPILYTLM 304
               A      T+V+ F+LPIL  L+
Sbjct: 290 ASTCAQGILFGTIVTFFSLPILEQLV 315