Pairwise Alignments

Query, 500 a.a., flippase from Methanococcus maripaludis S2

Subject, 469 a.a., sugar transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 76/393 (19%), Positives = 163/393 (41%), Gaps = 41/393 (10%)

Query: 36  LSKVEVGLFYAILDLISMVSIFRGLGLNNTVIYFIPKFLVQNRKDLIKSTLISVLLIQTI 95
           LS    G+    + ++ +V  F    LN +++   P +  + +  L++S  + V++   +
Sbjct: 30  LSPEHYGVLAVAMVVLELVRAFSAQWLNTSMLRLYPGYSDREQVQLVQSISLLVIIGSLL 89

Query: 96  MAVLMAVLMYLISPTLINKYINNQGQFGDISLIFVVFTIMIFGYYIFDGTKALLFNSFQG 155
             +++A  +++           N  +   +S +  V +I  +   +    + L       
Sbjct: 90  GFIVIAATLFIYQQL-------NWERLLVLSALLSVKSIFQYQLELSRLNERL------- 135

Query: 156 FQSQKIYGTCNFLNILSILILSIIFIYFGAGLYSPALAYTITPLIMILIYGKIFLKEVFP 215
                +Y     L  +S ++LSI+ + + A + S   A T++  I  L  G         
Sbjct: 136 ----SVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALCLG--------- 182

Query: 216 EFFTEKITFSKELLNDIFSYGMPIMFGSAGFIIMGYLDSICLTYFTGLNAVADYRNVAMP 275
               ++  +   +L  + +YG+PIM      ++ G +D + + +F G+N    Y   A  
Sbjct: 183 --LPQRPKWHIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVY---AAQ 237

Query: 276 TVLVLSYFASAICKVILPMSTEMWEKGEKK-NLSDGLKKILSYSFIISVPFAVILAYFPT 334
             L++         + +P+   + +  E K  L    K  L     ++ P  + L     
Sbjct: 238 ANLLMGVLGLVFMVISMPLYPNLAKHAEDKIALVSQHKTYLHLLVTLTFPALLGLGILQD 297

Query: 335 ELVNIFFNENYLTAAPTMS-ILSFGVIFLSMNTIVFDIFNGIGKPHLSAKILYIGALFNL 393
           E++ +F  E YL+ +  +  +L+  V  ++      D  +G+     + K+L++ +L  L
Sbjct: 298 EIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLD--HGLQFLLQTRKLLWV-SLSGL 354

Query: 394 IFNLLLIP----KFGTIGAAFATTLCYILIQIL 422
           I ++ L+P    +FG  GAA    +   L+ IL
Sbjct: 355 IASIFLLPLMLNQFGMFGAAITLLIVSGLVAIL 387