Pairwise Alignments

Query, 348 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 335 a.a., Radical SAM (NCBI) from Rhodospirillum rubrum S1H

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 55/290 (18%), Positives = 110/290 (37%), Gaps = 9/290 (3%)

Query: 28  PKVAIVELTNDCNYQCKFCPMNSENETIRRKVTREKTYMSFKDFKHIVDNYGYLIDDLGL 87
           P    V++T  CN  C  CP     +++          ++ K  + + D+    +  +  
Sbjct: 29  PSQINVDVTEVCNLACVHCPHPQFKKSVHYAGRMLDPALNDKMVEEVRDHGQGRVGYIRY 88

Query: 88  ASHGESLLHPE-FEKFILYLKEKRINWNITTNGSLLSKEMTEIFKKYPPTQIIFSLYTLD 146
            + GE + HP  F      +       ++TTNG LL +       +     I  S+    
Sbjct: 89  TAAGEPMAHPAIFPMLAKAVARSGTTVSLTTNGMLLDEGRRARLLETGIHLIDISIDAFL 148

Query: 147 SQRYEQLCVGGNLNVVLDNLNHYLE---HKDNNTKVLIRTINMPRLNGEMGKFKEYFAKY 203
            + Y ++ VGG+L  V   +   +E    + +  K+++  +  P   GE   F+ ++ + 
Sbjct: 149 PETYARVRVGGDLERVRGGVLRLMEGAARRVDPPKIVVSFVEQPFNQGETADFERFWKEN 208

Query: 204 RNVGYLFGVLNTWAGRVDISKYDKNLKNHKTSDKNNYCLQPWQHVIINSDTGVYLCNND- 262
                +   L++ AG          ++  +T      CL PW+ +++N    +  C  D 
Sbjct: 209 GAAYVVIRRLHSCAGAAQDLAATLRVEQGET---RRPCLYPWERIVLNPSGQLSFCPADW 265

Query: 263 -DDTPIGYLSKTELEKIWNSKEYIQVRKNILDGKLTQNSQCNECDTFIPT 311
                I     T + ++W    Y  +R+  L      +  C +C  +  T
Sbjct: 266 AHGAAIAEYRDTTIREVWQGPFYRALREAHLTNSYANHGFCGQCPDWAST 315