Pairwise Alignments

Query, 348 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 307 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 60.1 bits (144), Expect = 7e-14
 Identities = 60/291 (20%), Positives = 126/291 (43%), Gaps = 20/291 (6%)

Query: 25  PYMPKVAIVELTNDCNYQCKFCPMNSENETIRRKVTREKTYMSFKD--FKHIVDNYG-YL 81
           P  P+    +  + CN +C FCP     + I      +  +    D   +H V     YL
Sbjct: 29  PSFPRTIEFQTLSTCNAKCIFCPHKHSPKDIPHGRMDDALFRKIVDECARHFVGRVSPYL 88

Query: 82  IDDLGLASHGESLLHPEFEKFILYLKEKRINWNITTNGSLLSKEMTEIFKKYPPTQIIFS 141
            ++  +      +L    +K   + K K     I TN +LL++E  E   +   T +  S
Sbjct: 89  TNEPLMDKRMPEMLRYIHDKMPFFTKSK-----INTNAALLTEETGEALIRAGLTHLWIS 143

Query: 142 LYTLDSQRYEQLCVGGNLNVVLDNLNHYLEHKDN----NTKVLIRTINMPRLNGEMGKFK 197
           +     + Y +  +  +L+  L N++ +L  K      N KV++ T+    +  E+   +
Sbjct: 144 VNGYSPETY-RTSMDLDLDRTLTNIDTFLATKRRLGAKNPKVIVTTVETNIVKPELDYAR 202

Query: 198 EYFAKYRNVGYLFGVLNTWAGRVDISKYDKNLKNHKTSDKNNYCLQPWQHVIINSDTGVY 257
           +Y+ K R++ +    ++  AG   ++      K  K   K N  L   Q  I+ +   + 
Sbjct: 203 KYW-KERDIVFKVHAMDNRAGADSLT-----FKASKPKLKRNCDLFLKQAYIVENGDMII 256

Query: 258 LCNNDDDT-PIGYLSKTELEKIWNSKEYIQVRKNILDGKLTQNSQCNECDT 307
            C++   T  +G +++T ++++WNS+ +  + ++ + G  ++   C +C +
Sbjct: 257 CCHDWKQTVKVGNVAETSIKEVWNSRYFTDLIRDYVRGDYSRLGICAKCSS 307