Pairwise Alignments

Query, 320 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 392 a.a., heme d1 biosynthesis radical SAM protein NirJ from Pseudomonas fluorescens FW300-N2C3

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 14/143 (9%)

Query: 20  GKCAYTTLMPLLKNKKPNKPLFIKIETVNYCNSQCKYCPHPKMTREKGLISDELFN---- 75
           G+C    + P  K++ P     +    +  CN  CK+C     T    +  DEL      
Sbjct: 13  GQCPAPRVAPPGKHRPP----VVIWNLLRRCNLTCKHC---YATSADSVFRDELDTAAAL 65

Query: 76  KIAKELVNWGVKAVHLTNFGESLLDPKITERIDYLKNLDNDLYITIITNGFALSEKNIDK 135
           K+  +L + GV+ + L+  GE LL   + +   Y ++     ++ + TNG  +   NI +
Sbjct: 66  KVIDDLHDAGVRVLILSG-GEPLLRDDLFQLSAYARS--KGFFLALSTNGTLIDASNIQQ 122

Query: 136 ILNSNLDEIQISFDGFSKEHYEF 158
           I  +N D + IS DG    H EF
Sbjct: 123 IAAANFDYVGISIDGLEATHDEF 145