Pairwise Alignments

Query, 320 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 393 a.a., heme d1 biosynthesis radical SAM protein NirJ from Pseudomonas stutzeri RCH2

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 50  CNSQCKYCPHPKMTRE--KGLISDELFNKIAKELVNWGVKAVHLTNFGESLLDPKITERI 107
           CN  CK+C       E    L +DE   K+  EL   GV+ + L+  GE LL P I    
Sbjct: 40  CNLTCKHCYATSADSEFRDELDTDEAL-KVIDELHEAGVRVLILSG-GEPLLRPDIFLLA 97

Query: 108 DYLKNLDNDLYITIITNGFALSEKNIDKILNSNLDEIQISFDGFSKEHYEF 158
           DY +  D   ++ + TNG  + E NI +I  +  D + IS DG    H E+
Sbjct: 98  DYAR--DKGFFVALSTNGTLIDENNIGRIAAAQFDYVGISIDGLEAVHDEW 146