Pairwise Alignments

Query, 320 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 503 a.a., Radical SAM (NCBI) from Rhodospirillum rubrum S1H

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 44  IETVNYCNSQCKYCPHPKMTREKGLISDE----LFNKIA----KELVNWGV----KAVHL 91
           +E  ++CN  C +CP   + R +  +S++    +F+KIA    +    WG     + V L
Sbjct: 151 VELTSHCNLACPFCPSRTLKRPRAFLSEDHARLIFSKIADYGRRRDATWGYTQTERMVFL 210

Query: 92  TNFGESLLDPKITERIDYLKNLDNDLYITIITNGFALSEKNIDKILNSNLDEIQISFDGF 151
              GE LL P+ TE +   + +   L   + TN   L+ K  DKI  S L  I IS +  
Sbjct: 211 HVMGEPLLHPRFTEIVSAARAV--GLVPGLFTNATLLNAKARDKIFASGLSHITISLNVT 268

Query: 152 SKEHYEFYRTPFKYENIKSKLTNLLSEKDKRNS 184
            +  Y         +  + ++ +LL+E+ +R +
Sbjct: 269 DQAGYAELGARGLIDEQERRVLDLLAERKRRGA 301



 Score = 37.4 bits (85), Expect = 8e-07
 Identities = 15/60 (25%), Positives = 32/60 (53%)

Query: 244 MTILRNGDVVPCCLDFDGKINLGNCNEDTLQEIWENEKYTNFRNLVFNDVRNIDLCKNCM 303
           M +  +G V  C +D++  ++LG+  + ++ EIW+  +    R  +  D  +  LC+ C+
Sbjct: 434 MAVFVDGRVSFCNMDYENSVDLGSLLDSSVDEIWDGARLRRIREEMAADRLSEPLCQRCL 493