Pairwise Alignments

Query, 320 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 307 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 79/293 (26%), Positives = 141/293 (48%), Gaps = 34/293 (11%)

Query: 32  KNKKPNKPLFIKIETVNYCNSQCKYCPHPKMTRE--KGLISDELFNKIAKELVNWGVKAV 89
           K  +P+ P  I+ +T++ CN++C +CPH    ++   G + D LF KI  E     V  V
Sbjct: 25  KRFRPSFPRTIEFQTLSTCNAKCIFCPHKHSPKDIPHGRMDDALFRKIVDECARHFVGRV 84

Query: 90  --HLTNFGESLLDPKITERIDYLKNLDNDLYIT---IITNGFALSEKNIDKILNSNLDEI 144
             +LTN  E L+D ++ E + Y+   D   + T   I TN   L+E+  + ++ + L  +
Sbjct: 85  SPYLTN--EPLMDKRMPEMLRYIH--DKMPFFTKSKINTNAALLTEETGEALIRAGLTHL 140

Query: 145 QISFDGFSKEHYEFYRTPFKYENIKSKLTNL---LSEKDK---RNSKLV---IKLNTIYN 195
            IS +G+S    E YRT    + +   LTN+   L+ K +   +N K++   ++ N +  
Sbjct: 141 WISVNGYSP---ETYRTSMDLD-LDRTLTNIDTFLATKRRLGAKNPKVIVTTVETNIVKP 196

Query: 196 PDEISEKQLHE----FK-HGWNSVNGINIQKLHNWSSEEVNNNVNGCIDIYTYMTILRNG 250
             + + K   E    FK H  ++  G +       S  ++  N   C        I+ NG
Sbjct: 197 ELDYARKYWKERDIVFKVHAMDNRAGAD-SLTFKASKPKLKRN---CDLFLKQAYIVENG 252

Query: 251 DVVPCCLDFDGKINLGNCNEDTLQEIWENEKYTN-FRNLVFNDVRNIDLCKNC 302
           D++ CC D+   + +GN  E +++E+W +  +T+  R+ V  D   + +C  C
Sbjct: 253 DMIICCHDWKQTVKVGNVAETSIKEVWNSRYFTDLIRDYVRGDYSRLGICAKC 305