Pairwise Alignments

Query, 308 a.a., signal peptide peptidase SppA from Methanococcus maripaludis S2

Subject, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (277), Expect = 5e-29
 Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 7/230 (3%)

Query: 33  SKNIALINIDGTITLESSDSGLFSSIQPGVNDYVEWLDDAENNDNIKAVIIKINSPGGGA 92
           + +IA++   G I   S   G       G +     L +A N+ N+KAV+++++SPGG A
Sbjct: 324 ANDIAVVVASGAIMDGSQPRGTV-----GGDTVAGLLREARNDSNVKAVVLRVDSPGGSA 378

Query: 93  VASEKLSRKIKEVSEK-KPVVAYIENMGASAAYQAASSTNYIVAERQAVVGSIGVRMELI 151
            ASE +  +I+ +    KPVV  + ++ AS  Y  + S + IVA+   + GSIG+   + 
Sbjct: 379 FASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVIT 438

Query: 152 HYYGLMEKLGINTTSITGGKYKDIGTPTRSMTEEEYAMLESMVNESYYEFVSWVAENRNM 211
            +   +  LGI T  +    +   G  T  +T+     ++  +   Y  F+S VAE R +
Sbjct: 439 TFEKGLNNLGIYTDGVGTTPFSGQGLTT-GLTQGAKDAIQLGIEHGYQRFISLVAEKRGL 497

Query: 212 TINETLEVADGKIYSGTQAQRVGLVDITGTEDDAVDMAVKLGNITNPDIY 261
           T+    E+A G++++   AQ +GLVD  G  DDAV +A  L  +   ++Y
Sbjct: 498 TLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLY 547



 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 30/269 (11%)

Query: 2   KKIYYYSIAVFLIIAILMVGLL--VFVSSDG----ISSKNIALINIDGTIT--------L 47
           K I +  +A+  +I +L +G++  ++V +D     +   +  ++N+ G I         +
Sbjct: 17  KAITFIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQSTHINPM 76

Query: 48  ESSDSGLFSSIQPGVN---DYVEWLDDAENNDNIKAVIIKINS-PGGGAVASEKLSRKIK 103
           +S    +F    P  N   D VE L  A+N++N+  +++ +   P         +++ I 
Sbjct: 77  DSFTGSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAIN 136

Query: 104 EVSEK-KPVVAYIENMGASAAYQAASSTNYIVAERQAVVGSIGVRMELIHYYGLMEKLGI 162
           E     KPV A  +    S  Y A+ +    +A   AV+   G     ++Y  L+EKL +
Sbjct: 137 EFKASGKPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLLK-GYSAYSMYYKTLLEKLDV 195

Query: 163 NTTSITGGKYKDIGTP--TRSMTEEEYAMLESMVNESYYEFVSWVAENRNM---TINETL 217
            T     G YK    P     M++         + + +  +V  VA NR +   T+  ++
Sbjct: 196 TTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSM 255

Query: 218 E--VADGKIYSGTQA---QRVGLVDITGT 241
           E  VA  K  +G  A   ++VGLVD   T
Sbjct: 256 EQFVAQLKEVNGDLAALSKKVGLVDELAT 284