Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 649 a.a., Dimethylglycine dehydrogenase (ferredoxin), FeS subunit DgcB (EC 1.5.7.-) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 75/291 (25%), Positives = 130/291 (44%), Gaps = 15/291 (5%)

Query: 184 ENIYNCTTCGRCVEVCPKEIDIVHNAVEKLREKTFKKGYNLDSHLEVRKNVLSQNRS--- 240
           E +++CTTC  CVE CP  I+ V   V+  R  T +KG   +   EV +N+++ +     
Sbjct: 314 ETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEVLENLIATDNPGGF 373

Query: 241 VPKEKTSFLEEVSDEYIVENEKMRVAFFTG-CLVDFRLQEIGKSAIRVLNAHGVS-VIIP 298
            P  + ++  +++   + E +   V F+ G    D R Q   ++ ++VL A  +   ++ 
Sbjct: 374 APGGRMNWAADLNLNLLSEKKSTDVLFWVGDGAFDMRNQRTLRAFVKVLKAAKIDFAVLG 433

Query: 299 KNQVCCGSPFIRTGQTDISESLKKQNLEIFNKLNVDSVVTLCAGCGSTLKNDYKEKKFKV 358
             +   G    R G     + L K+N++   K + + +VT        LKN+Y       
Sbjct: 434 LEERDSGDVARRLGDEATFQLLAKRNIQTLAKYSFNRIVTCDPHSFHVLKNEYGAFDGNY 493

Query: 359 MDITEVLVKVGLIDYKPLDI------TVTYHDPCHLRRGQKVYLEPRKILESIPKLKFIE 412
           +          +ID   L++      +VTYHDPC+L R    Y  PR++L ++  ++  E
Sbjct: 494 LVQHHSTYMAEIIDAGALNLGQHKGDSVTYHDPCYLGRYNGEYEAPRQVLRAL-GIEVKE 552

Query: 413 ME---IPDQCCGAGGGVRSGKPEVAEAIGKRKANMIYATDADYLITVCPFC 460
           M+      +CCG GGG         + I   +   I  T A+ +   CP C
Sbjct: 553 MQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAELVAVGCPQC 603