Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 234 a.a., succinate dehydrogenase and fumarate reductase iron-sulfur protein from Pseudomonas stutzeri RCH2

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 16/209 (7%)

Query: 23  LTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKTKV-----EDNMIIE 77
           L +LD L  I K   +   +R SC+ G CGS  + IN K+ LAC T +      + +++ 
Sbjct: 31  LMVLDVLALI-KEQDQGFSYRRSCREGVCGSDGMNINGKNGLACITPLSAVVKNNKLVVR 89

Query: 78  PLEGFDVISDLVVDREPYYKKIGTLRNYIQKKNEKISEKELDGLKLYPDDLKDVKKIRGC 137
           PL G  VI DL VD   +YK+   +R Y+       + + L      P+D + +  +  C
Sbjct: 90  PLPGLPVIRDLAVDMSIFYKQYEKVRPYLMNDTPPPAIERLQS----PEDREKLDGLYEC 145

Query: 138 IDCLSCIAMCPARKYS--NYPGPTLMRQLARFAFDPKD-EIDREKEAFDE--NIYNCTTC 192
           I C  C   CP+  ++   + GP    Q  RF  D +D E +      D+  +++ C   
Sbjct: 146 ILCACCSTSCPSFWWNPDKFLGPAASLQAYRFLADSRDTETENRLAGLDDPFSVFRCRGI 205

Query: 193 GRCVEVCPKEIDIVHNAVEKLREKTFKKG 221
             CV+VCPK ++    A+  +R    + G
Sbjct: 206 MNCVDVCPKGLNPT-KAIGHIRNMLLQSG 233